Open Access
Biophysical Journal, volume 102, issue 1, pages 136-143
NMR solution structure of rat Aβ(1-16): Toward understanding the mechanism of rats' resistance to Alzheimer's disease
Istrate Andrey N
1, 2, 3
,
Polshakov Vladimir I
,
Makarov Alexander A.
1, 2, 3
,
Козин С. А.
4, 5
,
Mantsyzov Alexey B.
1, 6, 7
,
Tsvetkov Philipp O
,
Tsvetkov Philipp O.
1, 2, 3
,
Kulikova Alexandra A
1, 2, 3
,
Polshakov Vladimir I.
1, 6, 7
1
Moscow Russia
|
2
RUSSIAN ACADEMY OF SCIENCES
5
7
Faculty of Fundamental Medicine
Publication type: Journal Article
Publication date: 2012-01-04
Journal:
Biophysical Journal
Quartile SCImago
Q1
Quartile WOS
Q2
Impact factor: 3.4
ISSN: 00063495, 15420086
PubMed ID:
22225807
Biophysics
Abstract
In an attempt to reveal the mechanism of rats' resistance to Alzheimer's disease, we determined the structure of the metal-binding domain 1-16 of rat β-amyloid (rat Aβ(1-16)) in solution in the absence and presence of zinc ions. A zinc-induced dimerization of the domain was detected. The zinc coordination site was found to involve residues His-6 and His-14 of both peptide chains. We used experimental restraints obtained from analyses of NMR and isothermal titration calorimetry data to perform structure calculations. The calculations employed an explicit water environment and a simulated annealing molecular-dynamics protocol followed by quantum-mechanical/molecular-mechanical optimization. We found that the C-tails of the two polypeptide chains of the rat Aβ(1-16) dimer are oriented in opposite directions to each other, which hinders the assembly of rat Aβ dimers into oligomeric aggregates. Thus, the differences in the structure of zinc-binding sites of human and rat Aβ(1-16), their ability to form regular cross-monomer bonds, and the orientation of their hydrophobic C-tails could be responsible for the resistance of rats to Alzheimer's disease.
Citations by journals
1
2
3
4
5
|
|
Molecular Biology
|
Molecular Biology
5 publications, 9.62%
|
International Journal of Molecular Sciences
|
International Journal of Molecular Sciences
5 publications, 9.62%
|
Metallomics
|
Metallomics
3 publications, 5.77%
|
Coordination Chemistry Reviews
|
Coordination Chemistry Reviews
3 publications, 5.77%
|
Scientific Reports
|
Scientific Reports
2 publications, 3.85%
|
Journal of Alzheimer's Disease
|
Journal of Alzheimer's Disease
2 publications, 3.85%
|
International Journal of Peptide Research and Therapeutics
|
International Journal of Peptide Research and Therapeutics
2 publications, 3.85%
|
Chemistry - A European Journal
|
Chemistry - A European Journal
2 publications, 3.85%
|
Biochemistry (Moscow)
|
Biochemistry (Moscow)
2 publications, 3.85%
|
Angewandte Chemie - International Edition
|
Angewandte Chemie - International Edition
1 publication, 1.92%
|
Molecular BioSystems
|
Molecular BioSystems, 1, 1.92%
Molecular BioSystems
1 publication, 1.92%
|
Journal of Biomolecular Structure and Dynamics
|
Journal of Biomolecular Structure and Dynamics
1 publication, 1.92%
|
Current Topics in Medicinal Chemistry
|
Current Topics in Medicinal Chemistry
1 publication, 1.92%
|
Journal of Cerebral Blood Flow and Metabolism
|
Journal of Cerebral Blood Flow and Metabolism
1 publication, 1.92%
|
Molecules
|
Molecules
1 publication, 1.92%
|
Frontiers in Neuroscience
|
Frontiers in Neuroscience
1 publication, 1.92%
|
Neurotoxicity Research
|
Neurotoxicity Research
1 publication, 1.92%
|
Applied Magnetic Resonance
|
Applied Magnetic Resonance
1 publication, 1.92%
|
Journal of Membrane Biology
|
Journal of Membrane Biology
1 publication, 1.92%
|
Electrochemistry Communications
|
Electrochemistry Communications
1 publication, 1.92%
|
Mendeleev Communications
|
Mendeleev Communications
1 publication, 1.92%
|
International Journal of Mass Spectrometry
|
International Journal of Mass Spectrometry
1 publication, 1.92%
|
NeuroToxicology
|
NeuroToxicology
1 publication, 1.92%
|
Chemical Physics Letters
|
Chemical Physics Letters
1 publication, 1.92%
|
Journal of Mass Spectrometry
|
Journal of Mass Spectrometry
1 publication, 1.92%
|
ChemPhysChem
|
ChemPhysChem
1 publication, 1.92%
|
Angewandte Chemie
|
Angewandte Chemie
1 publication, 1.92%
|
Journal of Physical Chemistry B
|
Journal of Physical Chemistry B
1 publication, 1.92%
|
ACS Chemical Neuroscience
|
ACS Chemical Neuroscience
1 publication, 1.92%
|
Journal of Medicinal Chemistry
|
Journal of Medicinal Chemistry
1 publication, 1.92%
|
1
2
3
4
5
|
Citations by publishers
1
2
3
4
5
6
7
8
|
|
Elsevier
|
Elsevier
8 publications, 15.38%
|
Wiley
|
Wiley
7 publications, 13.46%
|
Pleiades Publishing
|
Pleiades Publishing
7 publications, 13.46%
|
Springer Nature
|
Springer Nature
7 publications, 13.46%
|
Multidisciplinary Digital Publishing Institute (MDPI)
|
Multidisciplinary Digital Publishing Institute (MDPI)
6 publications, 11.54%
|
Royal Society of Chemistry (RSC)
|
Royal Society of Chemistry (RSC)
5 publications, 9.62%
|
American Chemical Society (ACS)
|
American Chemical Society (ACS)
3 publications, 5.77%
|
IOS Press
|
IOS Press
2 publications, 3.85%
|
|
, 1, 1.92%
1 publication, 1.92%
|
Taylor & Francis
|
Taylor & Francis
1 publication, 1.92%
|
Bentham Science
|
Bentham Science
1 publication, 1.92%
|
SAGE
|
SAGE
1 publication, 1.92%
|
Frontiers Media S.A.
|
Frontiers Media S.A.
1 publication, 1.92%
|
Media Sphere Publishing Group
|
Media Sphere Publishing Group
1 publication, 1.92%
|
1
2
3
4
5
6
7
8
|
- We do not take into account publications that without a DOI.
- Statistics recalculated only for publications connected to researchers, organizations and labs registered on the platform.
- Statistics recalculated weekly.
{"yearsCitations":{"type":"bar","data":{"show":true,"labels":[2012,2013,2014,2015,2016,2017,2018,2019,2020,2021,2022,2023],"ids":[0,0,0,0,0,0,0,0,0,0,0,0],"codes":[0,0,0,0,0,0,0,0,0,0,0,0],"imageUrls":["","","","","","","","","","","",""],"datasets":[{"label":"Citations number","data":[1,4,6,5,9,6,7,1,6,1,1,5],"backgroundColor":["#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6"],"percentage":["1.92","7.69","11.54","9.62","17.31","11.54","13.46","1.92","11.54","1.92","1.92","9.62"],"barThickness":null}]},"options":{"indexAxis":"x","maintainAspectRatio":true,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":1,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Citations per year","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}},"journals":{"type":"bar","data":{"show":true,"labels":["Molecular Biology","International Journal of Molecular Sciences","Metallomics","Coordination Chemistry Reviews","Scientific Reports","Journal of Alzheimer's Disease","International Journal of Peptide Research and Therapeutics","Chemistry - A European Journal","Biochemistry (Moscow)","Angewandte Chemie - International Edition","Molecular BioSystems","Journal of Biomolecular Structure and Dynamics","Current Topics in Medicinal Chemistry","Journal of Cerebral Blood Flow and Metabolism","Molecules","Frontiers in Neuroscience","Neurotoxicity Research","Applied Magnetic Resonance","Journal of Membrane Biology","Electrochemistry Communications","Mendeleev Communications","International Journal of Mass Spectrometry","NeuroToxicology","Chemical Physics Letters","Journal of Mass Spectrometry","ChemPhysChem","Angewandte Chemie","Journal of Physical Chemistry B","ACS Chemical Neuroscience","Journal of Medicinal Chemistry"],"ids":[1134,14627,357,13437,13767,15085,10238,24708,2119,19215,25317,3040,3277,22775,1770,16373,5556,22807,5272,177,5294,6811,2801,5579,23423,16306,25450,14990,5507,3673],"codes":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0],"imageUrls":["\/storage\/images\/resized\/oZgeErrVFhuDksyqFURLvYS1wtVSBWczh001igGo_medium.webp","\/storage\/images\/resized\/MjH1ITP7lMYGxeqUZfkt2BnVLgjkk413jwBV97XX_medium.webp","\/storage\/images\/resized\/leiAYcRDGTSl5B1eCnwpSGqmDEUEfDPPoYisFGhT_medium.webp","\/storage\/images\/resized\/GDnYOu1UpMMfMMRV6Aqle4H0YLLsraeD9IP9qScG_medium.webp","\/storage\/images\/resized\/voXLqlsvTwv5p3iMQ8Dhs95nqB4AXOG7Taj7G4ra_medium.webp","\/storage\/images\/resized\/KqWdDIHwzps3KNMz2kSZBC4SgMnkL3bwEKJqtZ2u_medium.webp","\/storage\/images\/resized\/voXLqlsvTwv5p3iMQ8Dhs95nqB4AXOG7Taj7G4ra_medium.webp","\/storage\/images\/resized\/bRyGpdm98BkAUYiK1YFNpl5Z7hPu6Gd87gbIeuG3_medium.webp","\/storage\/images\/resized\/oZgeErrVFhuDksyqFURLvYS1wtVSBWczh001igGo_medium.webp","\/storage\/images\/resized\/bRyGpdm98BkAUYiK1YFNpl5Z7hPu6Gd87gbIeuG3_medium.webp","","\/storage\/images\/resized\/5YZtvLvkPZuc2JHOaZsjCvGSHFCuC3drUwN3YAc5_medium.webp","\/storage\/images\/resized\/doUaFUZdxUEQjLi1TwZjGHi8HXYNWWSk04dSC6Xh_medium.webp","\/storage\/images\/resized\/ruydfaB80LDjlkYqsfOeUAZohOIODyq7bQzis5O7_medium.webp","\/storage\/images\/resized\/MjH1ITP7lMYGxeqUZfkt2BnVLgjkk413jwBV97XX_medium.webp","\/storage\/images\/resized\/4QWA67eqfcfyOiA8Wk7YnqroHFqQbTsmDJUYTCTg_medium.webp","\/storage\/images\/resized\/voXLqlsvTwv5p3iMQ8Dhs95nqB4AXOG7Taj7G4ra_medium.webp","\/storage\/images\/resized\/voXLqlsvTwv5p3iMQ8Dhs95nqB4AXOG7Taj7G4ra_medium.webp","\/storage\/images\/resized\/voXLqlsvTwv5p3iMQ8Dhs95nqB4AXOG7Taj7G4ra_medium.webp","\/storage\/images\/resized\/GDnYOu1UpMMfMMRV6Aqle4H0YLLsraeD9IP9qScG_medium.webp","\/storage\/images\/resized\/GDnYOu1UpMMfMMRV6Aqle4H0YLLsraeD9IP9qScG_medium.webp","\/storage\/images\/resized\/GDnYOu1UpMMfMMRV6Aqle4H0YLLsraeD9IP9qScG_medium.webp","\/storage\/images\/resized\/GDnYOu1UpMMfMMRV6Aqle4H0YLLsraeD9IP9qScG_medium.webp","\/storage\/images\/resized\/GDnYOu1UpMMfMMRV6Aqle4H0YLLsraeD9IP9qScG_medium.webp","\/storage\/images\/resized\/bRyGpdm98BkAUYiK1YFNpl5Z7hPu6Gd87gbIeuG3_medium.webp","\/storage\/images\/resized\/bRyGpdm98BkAUYiK1YFNpl5Z7hPu6Gd87gbIeuG3_medium.webp","\/storage\/images\/resized\/bRyGpdm98BkAUYiK1YFNpl5Z7hPu6Gd87gbIeuG3_medium.webp","\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp","\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp","\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp"],"datasets":[{"label":"","data":[5,5,3,3,2,2,2,2,2,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1],"backgroundColor":["#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6"],"percentage":[9.62,9.62,5.77,5.77,3.85,3.85,3.85,3.85,3.85,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92,1.92],"barThickness":13}]},"options":{"indexAxis":"y","maintainAspectRatio":false,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":null,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Journals","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}},"publishers":{"type":"bar","data":{"show":true,"labels":["Elsevier","Wiley","Pleiades Publishing","Springer Nature","Multidisciplinary Digital Publishing Institute (MDPI)","Royal Society of Chemistry (RSC)","American Chemical Society (ACS)","IOS Press","","Taylor & Francis","Bentham Science","SAGE","Frontiers Media S.A.","Media Sphere Publishing Group"],"ids":[17,11,101,8,202,123,40,29,6887,18,39,31,208,7595],"codes":[0,0,0,0,0,0,0,0,0,0,0,0,0,0],"imageUrls":["\/storage\/images\/resized\/GDnYOu1UpMMfMMRV6Aqle4H0YLLsraeD9IP9qScG_medium.webp","\/storage\/images\/resized\/bRyGpdm98BkAUYiK1YFNpl5Z7hPu6Gd87gbIeuG3_medium.webp","\/storage\/images\/resized\/oZgeErrVFhuDksyqFURLvYS1wtVSBWczh001igGo_medium.webp","\/storage\/images\/resized\/voXLqlsvTwv5p3iMQ8Dhs95nqB4AXOG7Taj7G4ra_medium.webp","\/storage\/images\/resized\/MjH1ITP7lMYGxeqUZfkt2BnVLgjkk413jwBV97XX_medium.webp","\/storage\/images\/resized\/leiAYcRDGTSl5B1eCnwpSGqmDEUEfDPPoYisFGhT_medium.webp","\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp","\/storage\/images\/resized\/KqWdDIHwzps3KNMz2kSZBC4SgMnkL3bwEKJqtZ2u_medium.webp","","\/storage\/images\/resized\/5YZtvLvkPZuc2JHOaZsjCvGSHFCuC3drUwN3YAc5_medium.webp","\/storage\/images\/resized\/doUaFUZdxUEQjLi1TwZjGHi8HXYNWWSk04dSC6Xh_medium.webp","\/storage\/images\/resized\/ruydfaB80LDjlkYqsfOeUAZohOIODyq7bQzis5O7_medium.webp","\/storage\/images\/resized\/4QWA67eqfcfyOiA8Wk7YnqroHFqQbTsmDJUYTCTg_medium.webp","\/storage\/images\/resized\/ZpQUhhOveFrtLdTt77Kuc5GTKDcUAzX6BNhjOaZC_medium.webp"],"datasets":[{"label":"","data":[8,7,7,7,6,5,3,2,1,1,1,1,1,1],"backgroundColor":["#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6"],"percentage":[15.38,13.46,13.46,13.46,11.54,9.62,5.77,3.85,1.92,1.92,1.92,1.92,1.92,1.92],"barThickness":13}]},"options":{"indexAxis":"y","maintainAspectRatio":false,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":null,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Publishers","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}}}
Metrics
Cite this
GOST |
RIS |
BibTex |
MLA
Cite this
GOST
Copy
Istrate A. N. et al. NMR solution structure of rat Aβ(1-16): Toward understanding the mechanism of rats' resistance to Alzheimer's disease // Biophysical Journal. 2012. Vol. 102. No. 1. pp. 136-143.
GOST all authors (up to 50)
Copy
Istrate A. N., Tsvetkov P. O., Mantsyzov A. B., Kulikova A. A., Козин С. А., Makarov A. A., Polshakov V. I., Tsvetkov P. O., Kulikova A. A., Polshakov V. I. NMR solution structure of rat Aβ(1-16): Toward understanding the mechanism of rats' resistance to Alzheimer's disease // Biophysical Journal. 2012. Vol. 102. No. 1. pp. 136-143.
Cite this
RIS
Copy
TY - JOUR
DO - 10.1016/j.bpj.2011.11.4006
UR - https://doi.org/10.1016%2Fj.bpj.2011.11.4006
TI - NMR solution structure of rat Aβ(1-16): Toward understanding the mechanism of rats' resistance to Alzheimer's disease
T2 - Biophysical Journal
AU - Istrate, Andrey N
AU - Tsvetkov, Philipp O
AU - Mantsyzov, Alexey B.
AU - Kulikova, Alexandra A.
AU - Козин, С. А.
AU - Makarov, Alexander A.
AU - Polshakov, Vladimir I
AU - Tsvetkov, Philipp O.
AU - Kulikova, Alexandra A
AU - Polshakov, Vladimir I.
PY - 2012
DA - 2012/01/04 00:00:00
PB - Biophysical Society
SP - 136-143
IS - 1
VL - 102
PMID - 22225807
SN - 0006-3495
SN - 1542-0086
ER -
Cite this
BibTex
Copy
@article{2012_Istrate,
author = {Andrey N Istrate and Philipp O Tsvetkov and Alexey B. Mantsyzov and Alexandra A. Kulikova and С. А. Козин and Alexander A. Makarov and Vladimir I Polshakov and Philipp O. Tsvetkov and Alexandra A Kulikova and Vladimir I. Polshakov},
title = {NMR solution structure of rat Aβ(1-16): Toward understanding the mechanism of rats' resistance to Alzheimer's disease},
journal = {Biophysical Journal},
year = {2012},
volume = {102},
publisher = {Biophysical Society},
month = {jan},
url = {https://doi.org/10.1016%2Fj.bpj.2011.11.4006},
number = {1},
pages = {136--143},
doi = {10.1016/j.bpj.2011.11.4006}
}
Cite this
MLA
Copy
Istrate, Andrey N., et al. “NMR solution structure of rat Aβ(1-16): Toward understanding the mechanism of rats' resistance to Alzheimer's disease.” Biophysical Journal, vol. 102, no. 1, Jan. 2012, pp. 136-143. https://doi.org/10.1016%2Fj.bpj.2011.11.4006.
Profiles