Open Access
Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology, volume 166, issue 1, pages 99-108
Global and gene specific DNA methylation changes during zebrafish development
1
Department of Pharmacology and Environmental Toxicology Research Program, School of Pharmacy, University of Mississippi, University, MS 38677, USA
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2
USDA, ARS, Genomics and Bioinformatics Research Unit, Stoneville, MS, 38776, USA.
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Publication type: Journal Article
Publication date: 2013-09-01
Quartile SCImago
Q1
Quartile WOS
Q1
Impact factor: 2.2
ISSN: 10964959, 18791107
PubMed ID:
23876386
Biochemistry
Molecular Biology
Physiology
Abstract
DNA methylation is dynamic through the life of an organism. Previous studies have primarily focused on DNA methylation changes during very early embryogenesis. In this study, global and gene specific DNA methylation in zebrafish (Danio rerio) embryos, larvae and adult livers were compared. The percent methylation of cytosines was low in 2 to 4.3h post fertilization (hpf) zebrafish embryos and was consistently higher in zebrafish older than 6 hpf. Furthermore, quantitative real-time PCR (qPCR) results showed relatively high DNA methyltransferase 1 (dnmt1) and low glycine N-methyltransferase (gnmt) mRNA expression in early embryogenesis. By studying methylation patterns and gene expression of five developmentally important genes, namely vasa, Ras-association domain family member 1 (rassf1), telomerase reverse transcriptase (tert), c-jun and c-myca, we found that the timing of changes in DNA methylation patterns was gene specific, and changes in gene expression were not necessarily correlated with the DNA methylation patterns.
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- Statistics recalculated weekly.
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FANG X. et al. Global and gene specific DNA methylation changes during zebrafish development // Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology. 2013. Vol. 166. No. 1. pp. 99-108.
GOST all authors (up to 50)
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FANG X., Corrales J., Thornton C., Scheffler B., WILLETT K. Global and gene specific DNA methylation changes during zebrafish development // Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology. 2013. Vol. 166. No. 1. pp. 99-108.
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TY - JOUR
DO - 10.1016/j.cbpb.2013.07.007
UR - https://doi.org/10.1016%2Fj.cbpb.2013.07.007
TI - Global and gene specific DNA methylation changes during zebrafish development
T2 - Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology
AU - FANG, XIEFAN
AU - Corrales, Jone
AU - Thornton, Cammi
AU - Scheffler, B.
AU - WILLETT, K.L.
PY - 2013
DA - 2013/09/01 00:00:00
PB - Elsevier
SP - 99-108
IS - 1
VL - 166
PMID - 23876386
SN - 1096-4959
SN - 1879-1107
ER -
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@article{2013_FANG,
author = {XIEFAN FANG and Jone Corrales and Cammi Thornton and B. Scheffler and K.L. WILLETT},
title = {Global and gene specific DNA methylation changes during zebrafish development},
journal = {Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology},
year = {2013},
volume = {166},
publisher = {Elsevier},
month = {sep},
url = {https://doi.org/10.1016%2Fj.cbpb.2013.07.007},
number = {1},
pages = {99--108},
doi = {10.1016/j.cbpb.2013.07.007}
}
Cite this
MLA
Copy
FANG, XIEFAN, et al. “Global and gene specific DNA methylation changes during zebrafish development.” Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology, vol. 166, no. 1, Sep. 2013, pp. 99-108. https://doi.org/10.1016%2Fj.cbpb.2013.07.007.