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Open access
Genomics, volume 102, issue 4, pages 296-300

Conserved domains and SINE diversity during animal evolution

Luchetti Andrea
Mantovani Barbara
Publication typeJournal Article
Publication date2013-10-01
Journal: Genomics
Quartile SCImago
Q2
Quartile WOS
Q1
Impact factor4.4
ISSN08887543, 10898646
Genetics
Abstract
Eukaryotic genomes harbour a number of mobile genetic elements (MGEs); moving from one genomic location to another, they are known to impact on the host genome. Short interspersed elements (SINEs) are well-represented, non-autonomous retroelements and they are likely the most diversified MGEs. In some instances, sequence domains conserved across unrelated SINEs have been identified; remarkably, one of these, called Nin, has been conserved since the Radiata-Bilateria splitting. Here we report on two new domains: Inv, derived from Nin, identified in insects and in deuterostomes, and Pln, restricted to polyneopteran insects. The identification of Inv and Pln sequences allowed us to retrieve new SINEs, two in insects and one in a hemichordate. The diverse structural combination of the different domains in different SINE families, during metazoan evolution, offers a clearer view of SINE diversity and their frequent de novo emergence through module exchange, possibly underlying the high evolutionary success of SINEs.

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GOST Copy
Luchetti A., Mantovani B. Conserved domains and SINE diversity during animal evolution // Genomics. 2013. Vol. 102. No. 4. pp. 296-300.
GOST all authors (up to 50) Copy
Luchetti A., Mantovani B. Conserved domains and SINE diversity during animal evolution // Genomics. 2013. Vol. 102. No. 4. pp. 296-300.
RIS |
Cite this
RIS Copy
TY - JOUR
DO - 10.1016/j.ygeno.2013.08.005
UR - https://doi.org/10.1016%2Fj.ygeno.2013.08.005
TI - Conserved domains and SINE diversity during animal evolution
T2 - Genomics
AU - Luchetti, Andrea
AU - Mantovani, Barbara
PY - 2013
DA - 2013/10/01 00:00:00
PB - Elsevier
SP - 296-300
IS - 4
VL - 102
SN - 0888-7543
SN - 1089-8646
ER -
BibTex |
Cite this
BibTex Copy
@article{2013_Luchetti
author = {Andrea Luchetti and Barbara Mantovani},
title = {Conserved domains and SINE diversity during animal evolution},
journal = {Genomics},
year = {2013},
volume = {102},
publisher = {Elsevier},
month = {oct},
url = {https://doi.org/10.1016%2Fj.ygeno.2013.08.005},
number = {4},
pages = {296--300},
doi = {10.1016/j.ygeno.2013.08.005}
}
MLA
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MLA Copy
Luchetti, Andrea, and Barbara Mantovani. “Conserved domains and SINE diversity during animal evolution.” Genomics, vol. 102, no. 4, Oct. 2013, pp. 296-300. https://doi.org/10.1016%2Fj.ygeno.2013.08.005.
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