International Journal of Systematic and Evolutionary Microbiology, volume 69, issue 5, pages 1343-1349
Marmoricola mangrovicus sp. nov., an endophytic actinobacterium isolated from Kandelia candel
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3State Key Laboratory of Quality Research of Chinese Medicine and Institute of Chinese Medical Sciences, University of Macau, Macao, PR China
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Publication type: Journal Article
Publication date: 2019-03-01
Quartile SCImago
Q1
Quartile WOS
Q3
Impact factor: 2.8
ISSN: 14665026, 14665034
General Medicine
Microbiology
Ecology, Evolution, Behavior and Systematics
Abstract
A Gram-stain-positive, aerobic, motile, non-spore-forming and rod-shaped actinobacterium, designated strain 4Q3S-7T, was isolated from a piece of surface-sterilized bark of Kandelia candel collected at the Cotai Ecological Zone in Macao, China. Colonies were yellowish white, circular, smooth and convex. The 16S rRNA gene sequence of strain 4Q3S-7T exhibited highest similarities to Marmoricola ginsengisoli Gsoil 097T (97.6 %), Marmoricola solisilvae KIS18-7T (97.6 %) and Marmoricola pocheonensis Gsoil 818T (97.3 %). Phylogenetic analysis showed that strain 4Q3S-7T clustered with species of the genus Marmoricola and was clearly affiliated to the genus Marmoricola . Genomic analyses, including average nucleotide identity and DNA–DNA hybridization, clearly separated strain 4Q3S-7T from M. ginsengisoli Gsoil 097T, M. solisilvae KIS18-7T and M. pocheonensis Gsoil 818T with values below the thresholds for species delineation. Strain 4Q3S-7T had ll-2,6-diaminopimelic acid as the diagnostic diamino acid in the cell wall. The major fatty acids (>10 % of total fatty acids) were C18 : 0 10-methyl (TBSA), C18 : 1 ω9c, iso-C16 : 0 and iso-C16 : 0 2-OH. The predominant menaquinone was MK-8(H4). The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine, phosphatidylinositol and an unidentified phospholipid. The DNA G+C content of strain 4Q3S-7T was 72.0 mol% (draft genome sequence). Based on its phylogenetic, phenotypic and chemotaxonomic features, strain 4Q3S-7T is considered to represent a novel species of the genus Marmoricola , for which the name Marmoricola mangrovicus sp. nov. is proposed. The type strain is 4Q3S-7T (=KCTC 39790T=CGMCC 4.7424T).
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Li F. et al. Marmoricola mangrovicus sp. nov., an endophytic actinobacterium isolated from Kandelia candel // International Journal of Systematic and Evolutionary Microbiology. 2019. Vol. 69. No. 5. pp. 1343-1349.
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Li F., Jiang Z., Liu S., Tuo L., Lee S. B. M., Sun C. Marmoricola mangrovicus sp. nov., an endophytic actinobacterium isolated from Kandelia candel // International Journal of Systematic and Evolutionary Microbiology. 2019. Vol. 69. No. 5. pp. 1343-1349.
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TY - JOUR
DO - 10.1099/ijsem.0.003326
UR - https://doi.org/10.1099%2Fijsem.0.003326
TI - Marmoricola mangrovicus sp. nov., an endophytic actinobacterium isolated from Kandelia candel
T2 - International Journal of Systematic and Evolutionary Microbiology
AU - Li, Fei-Na
AU - Jiang, Zhong-Ke
AU - Liu, Shao-Wei
AU - Tuo, Li
AU - Lee, Simon Biing Ming
AU - Sun, Chenghang
PY - 2019
DA - 2019/03/01 00:00:00
PB - Microbiology Society
SP - 1343-1349
IS - 5
VL - 69
SN - 1466-5026
SN - 1466-5034
ER -
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@article{2019_Li,
author = {Fei-Na Li and Zhong-Ke Jiang and Shao-Wei Liu and Li Tuo and Simon Biing Ming Lee and Chenghang Sun},
title = {Marmoricola mangrovicus sp. nov., an endophytic actinobacterium isolated from Kandelia candel},
journal = {International Journal of Systematic and Evolutionary Microbiology},
year = {2019},
volume = {69},
publisher = {Microbiology Society},
month = {mar},
url = {https://doi.org/10.1099%2Fijsem.0.003326},
number = {5},
pages = {1343--1349},
doi = {10.1099/ijsem.0.003326}
}
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Li, Fei-Na, et al. “Marmoricola mangrovicus sp. nov., an endophytic actinobacterium isolated from Kandelia candel.” International Journal of Systematic and Evolutionary Microbiology, vol. 69, no. 5, Mar. 2019, pp. 1343-1349. https://doi.org/10.1099%2Fijsem.0.003326.
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