Open Access
Genes and Development, volume 31, issue 14, pages 1397-1405
How transcription circuits explore alternative architectures while maintaining overall circuit output
1
Department of Microbiology and Immunology, University of California at San Francisco, San Francisco, California 94158, USA
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2
1Department of Microbiology and Immunology, University of California at San Francisco, San Francisco, California 94158, USA
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Publication type: Journal Article
Publication date: 2017-07-15
Journal:
Genes and Development
Quartile SCImago
Q1
Quartile WOS
Q1
Impact factor: 10.5
ISSN: 08909369, 15495477
PubMed ID:
28860157
Genetics
Developmental Biology
Abstract
Transcription regulators bind to cis-regulatory sequences and thereby control the expression of target genes. While transcription regulators and the target genes that they regulate are often deeply conserved across species, the connections between the two change extensively over evolutionary timescales. In this review, we discuss case studies where, despite this extensive evolutionary rewiring, the resulting patterns of gene expression are preserved. We also discuss in silico models that reach the same general conclusions and provide additional insights into how this process occurs. Together, these approaches make a strong case that the preservation of gene expression patterns in the wake of extensive rewiring is a general feature of transcription circuit evolution.
Citations by journals
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Genetics
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2 publications, 7.14%
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Scientific Reports
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1 publication, 3.57%
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1 publication, 3.57%
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1 publication, 3.57%
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Evolution; international journal of organic evolution
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1 publication, 3.57%
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1 publication, 3.57%
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1 publication, 3.57%
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1 publication, 3.57%
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1 publication, 3.57%
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Science
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1 publication, 3.57%
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1 publication, 3.57%
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1 publication, 3.57%
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1 publication, 3.57%
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EMBO Reports
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1 publication, 3.57%
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PLoS Computational Biology
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1 publication, 3.57%
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iScience
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iScience
1 publication, 3.57%
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Citations by publishers
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1
2
3
4
5
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Springer Nature
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Springer Nature
5 publications, 17.86%
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Wiley
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3 publications, 10.71%
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Genetics Society of America
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3 publications, 10.71%
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Public Library of Science (PLoS)
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2 publications, 7.14%
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American Association for the Advancement of Science (AAAS)
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American Association for the Advancement of Science (AAAS)
2 publications, 7.14%
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Multidisciplinary Digital Publishing Institute (MDPI)
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Multidisciplinary Digital Publishing Institute (MDPI)
1 publication, 3.57%
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Oxford University Press
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Oxford University Press
1 publication, 3.57%
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American Society for Microbiology
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American Society for Microbiology
1 publication, 3.57%
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EMBO press
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EMBO press
1 publication, 3.57%
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Elsevier
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Elsevier
1 publication, 3.57%
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- We do not take into account publications that without a DOI.
- Statistics recalculated only for publications connected to researchers, organizations and labs registered on the platform.
- Statistics recalculated weekly.
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Dalal C. K., Johnson A. A. How transcription circuits explore alternative architectures while maintaining overall circuit output // Genes and Development. 2017. Vol. 31. No. 14. pp. 1397-1405.
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Dalal C. K., Johnson A. A. How transcription circuits explore alternative architectures while maintaining overall circuit output // Genes and Development. 2017. Vol. 31. No. 14. pp. 1397-1405.
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TY - JOUR
DO - 10.1101/gad.303362.117
UR - https://doi.org/10.1101%2Fgad.303362.117
TI - How transcription circuits explore alternative architectures while maintaining overall circuit output
T2 - Genes and Development
AU - Dalal, Chiraj K.
AU - Johnson, Alexander A.T.
PY - 2017
DA - 2017/07/15 00:00:00
PB - Cold Spring Harbor Laboratory
SP - 1397-1405
IS - 14
VL - 31
PMID - 28860157
SN - 0890-9369
SN - 1549-5477
ER -
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@article{2017_Dalal,
author = {Chiraj K. Dalal and Alexander A.T. Johnson},
title = {How transcription circuits explore alternative architectures while maintaining overall circuit output},
journal = {Genes and Development},
year = {2017},
volume = {31},
publisher = {Cold Spring Harbor Laboratory},
month = {jul},
url = {https://doi.org/10.1101%2Fgad.303362.117},
number = {14},
pages = {1397--1405},
doi = {10.1101/gad.303362.117}
}
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MLA
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Dalal, Chiraj K., and Alexander A.T. Johnson. “How transcription circuits explore alternative architectures while maintaining overall circuit output.” Genes and Development, vol. 31, no. 14, Jul. 2017, pp. 1397-1405. https://doi.org/10.1101%2Fgad.303362.117.