Open Access
Open access
Frontiers in Chemistry, volume 9

Scaffold Searching of FDA and EMA-Approved Drugs Identifies Lead Candidates for Drug Repurposing in Alzheimer’s Disease

Shityakov Sergey 1
Förster Carola Y. 2
DANDEKAR THOMAS 3
2
 
Department of Anaesthesiology, Intensive Care, Emergency and Pain Medicine, W�rzburg University Hospital, Germany
3
 
Department of Bioinformatics, Biocenter, University of W�rzburg, Germany
Publication typeJournal Article
Publication date2021-10-22
Quartile SCImago
Q1
Quartile WOS
Q2
Impact factor5.5
ISSN22962646
General Chemistry
Abstract

Clinical trials of novel therapeutics for Alzheimer’s Disease (AD) have consumed a significant amount of time and resources with largely negative results. Repurposing drugs already approved by the Food and Drug Administration (FDA), European Medicines Agency (EMA), or Worldwide for another indication is a more rapid and less expensive option. Therefore, we apply the scaffold searching approach based on known amyloid-beta (Aβ) inhibitor tramiprosate to screen the DrugCentral database (n = 4,642) of clinically tested drugs. As a result, menadione bisulfite and camphotamide substances with protrombogenic and neurostimulation/cardioprotection effects were identified as promising Aβ inhibitors with an improved binding affinity (ΔGbind) and blood-brain barrier permeation (logBB). Finally, the data was also confirmed by molecular dynamics simulations using implicit solvation, in particular as Molecular Mechanics Generalized Born Surface Area (MM-GBSA) model. Overall, the proposed in silico pipeline can be implemented through the early stage rational drug design to nominate some lead candidates for AD, which will be further validated in vitro and in vivo, and, finally, in a clinical trial.

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GOST Copy
Shityakov S. et al. Scaffold Searching of FDA and EMA-Approved Drugs Identifies Lead Candidates for Drug Repurposing in Alzheimer’s Disease // Frontiers in Chemistry. 2021. Vol. 9.
GOST all authors (up to 50) Copy
Shityakov S., Skorb E. V., Förster C. Y., DANDEKAR T. Scaffold Searching of FDA and EMA-Approved Drugs Identifies Lead Candidates for Drug Repurposing in Alzheimer’s Disease // Frontiers in Chemistry. 2021. Vol. 9.
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RIS Copy
TY - JOUR
DO - 10.3389/fchem.2021.736509
UR - https://doi.org/10.3389%2Ffchem.2021.736509
TI - Scaffold Searching of FDA and EMA-Approved Drugs Identifies Lead Candidates for Drug Repurposing in Alzheimer’s Disease
T2 - Frontiers in Chemistry
AU - Shityakov, Sergey
AU - Skorb, Ekaterina V
AU - Förster, Carola Y.
AU - DANDEKAR, THOMAS
PY - 2021
DA - 2021/10/22 00:00:00
PB - Frontiers Media S.A.
VL - 9
PMID - 34751244
SN - 2296-2646
ER -
BibTex
Cite this
BibTex Copy
@article{2021_Shityakov,
author = {Sergey Shityakov and Ekaterina V Skorb and Carola Y. Förster and THOMAS DANDEKAR},
title = {Scaffold Searching of FDA and EMA-Approved Drugs Identifies Lead Candidates for Drug Repurposing in Alzheimer’s Disease},
journal = {Frontiers in Chemistry},
year = {2021},
volume = {9},
publisher = {Frontiers Media S.A.},
month = {oct},
url = {https://doi.org/10.3389%2Ffchem.2021.736509},
doi = {10.3389/fchem.2021.736509}
}
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