Open Access

Science, volume 372, issue 6538, pages eabd5687

Mechanism and dynamics of fatty acid photodecarboxylase

Sorigué Damien ¹

Hadjidemetriou Kyprianos ²

Blangy Stéphanie ¹

Gotthard Guillaume ³

Bonvalet A. ⁴

Coquelle N ⁵

Samire P ^{1, 6}

Aleksandrov Alexey ⁴

Antonucci L. ⁴

Benachir A ⁴

Boutet Sébastien ⁷

Byrdin Martin ²

Cammarata Marco ⁸

Carbajo S. ⁷

Cuiné Stephan ¹

Doak R. B. ⁹

Foucar L. ⁹

Gorel Alexander ⁹

Grünbein M ⁹

HARTMANN E. ⁹

Hienerwadel Rainer ¹

Hilpert Mario ⁹

Kloos M. ⁹

Lane T.M. ⁷

Légeret B ¹

Legrand Pierre ¹⁰

Li-Beisson Yonghua ¹

Moulin Solène ¹

Nurizzo Didier ³

Peltier Gilles ¹

Schiró G ²

Shoeman Robert ⁹

Sliwa M. ¹¹

Solinas Xavier ⁴

Zhuang Bo ^{4, 6}

Barends Thomas R. M. ⁹

Colletier Jacques-Philippe ²

Joffre Manuel ⁴

Royant Antoine ^{2, 3}

Berthomieu Catherine ¹

Weik Martin ²

Domratcheva Tatiana ^{9, 12}

Brettel Klaus ⁶

Vos Marten H. ⁴

Schlichting Ilme ⁹

Arnoux Pascal ¹

Müller Pavel ⁶

Beisson Fred ¹

Hide authors affiliations Show authors affiliations: 12 affiliations

Aix-Marseille University, CEA, CNRS, Institute of Biosciences and Biotechnologies, BIAM Cadarache, 13108 Saint-Paul-lez-Durance, France. |

Université Grenoble Alpes, CEA, CNRS, Institut de Biologie Structurale, 38000 Grenoble, France. |

European Synchrotron Radiation Facility, 38043 Grenoble, France. |

⁴

LOB, CNRS, INSERM, Ecole Polytechnique, Institut Polytechnique de Paris, 91128 Palaiseau, France. |

⁵

Large-Scale Structures Group, Institut Laue Langevin, 38042 Grenoble Cedex 9, France. |

⁶

Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France. |

⁷

Linac Coherent Light Source (LCLS), SLAC National Accelerator Laboratory, Menlo Park, CA 94025, USA. |

⁸

Department of Physics, UMR UR1-CNRS 6251, University of Rennes 1, F-Rennes, France. |

⁹

Max-Planck-Institut für Medizinische Forschung, Jahnstrasse 29, 69120 Heidelberg, Germany. |

¹⁰

Synchrotron SOLEIL. L’Orme des Merisiers Saint-Aubin, BP 48, 91192 Gif-sur-Yvette, France. |

¹¹

Univ. Lille, CNRS, UMR 8516, LASIRE, LAboratoire de Spectroscopie pour les Interactions, la Réactivité et l’Environnement, 59000 Lille, France. |

¹²

Department of Chemistry, Lomonosov Moscow State University, Moscow 119991, Russia. |

Publication type: Journal Article

Publication date: 2021-04-09

American Association for the Advancement of Science (AAAS)

Journal: Science

Quartile SCImago

Quartile WOS

Impact factor: 56.9

ISSN: 00368075, 10959203

DOI: 10.1126/science.abd5687

Copy DOI

Multidisciplinary

Abstract

Fatty acid photodecarboxylase (FAP) is a photoenzyme with potential green chemistry applications. By combining static, time-resolved, and cryotrapping spectroscopy and crystallography as well as computation, we characterized Chlorella variabilis FAP reaction intermediates on time scales from subpicoseconds to milliseconds. High-resolution crystal structures from synchrotron and free electron laser x-ray sources highlighted an unusual bent shape of the oxidized flavin chromophore. We demonstrate that decarboxylation occurs directly upon reduction of the excited flavin by the fatty acid substrate. Along with flavin reoxidation by the alkyl radical intermediate, a major fraction of the cleaved carbon dioxide unexpectedly transformed in 100 nanoseconds, most likely into bicarbonate. This reaction is orders of magnitude faster than in solution. Two strictly conserved residues, R451 and C432, are essential for substrate stabilization and functional charge transfer.

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Citations by journals

	1 2 3 4 5 6 7
Angewandte Chemie	Angewandte Chemie, 7, 7.45% Angewandte Chemie 7 publications, 7.45%
Angewandte Chemie - International Edition	Angewandte Chemie - International Edition, 7, 7.45% Angewandte Chemie - International Edition 7 publications, 7.45%
Molecular Catalysis	Molecular Catalysis, 4, 4.26% Molecular Catalysis 4 publications, 4.26%
Journal of the American Chemical Society	Journal of the American Chemical Society, 4, 4.26% Journal of the American Chemical Society 4 publications, 4.26%
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ChemSusChem	ChemSusChem, 3, 3.19% ChemSusChem 3 publications, 3.19%
Acta Crystallographica Section D: Structural Biology	Acta Crystallographica Section D: Structural Biology, 2, 2.13% Acta Crystallographica Section D: Structural Biology 2 publications, 2.13%
IUCrJ	IUCrJ, 2, 2.13% IUCrJ 2 publications, 2.13%
Nature Communications	Nature Communications, 2, 2.13% Nature Communications 2 publications, 2.13%
Nature Chemistry	Nature Chemistry, 2, 2.13% Nature Chemistry 2 publications, 2.13%
Chemical Reviews	Chemical Reviews, 2, 2.13% Chemical Reviews 2 publications, 2.13%
ChemBioChem	ChemBioChem, 2, 2.13% ChemBioChem 2 publications, 2.13%
ChemCatChem	ChemCatChem, 2, 2.13% ChemCatChem 2 publications, 2.13%
ACS Catalysis	ACS Catalysis, 2, 2.13% ACS Catalysis 2 publications, 2.13%
Journal of Physical Chemistry Letters	Journal of Physical Chemistry Letters, 2, 2.13% Journal of Physical Chemistry Letters 2 publications, 2.13%
Physical Chemistry Chemical Physics	Physical Chemistry Chemical Physics, 2, 2.13% Physical Chemistry Chemical Physics 2 publications, 2.13%
Science	Science, 2, 2.13% Science 2 publications, 2.13%
Nature Protocols	Nature Protocols, 1, 1.06% Nature Protocols 1 publication, 1.06%
Frontiers in Molecular Biosciences	Frontiers in Molecular Biosciences, 1, 1.06% Frontiers in Molecular Biosciences 1 publication, 1.06%
Biomolecules	Biomolecules, 1, 1.06% Biomolecules 1 publication, 1.06%
Crystals	Crystals, 1, 1.06% Crystals 1 publication, 1.06%
Nature Reviews Methods Primers	Nature Reviews Methods Primers, 1, 1.06% Nature Reviews Methods Primers 1 publication, 1.06%
EFB Bioeconomy Journal	EFB Bioeconomy Journal, 1, 1.06% EFB Bioeconomy Journal 1 publication, 1.06%
Science advances	Science advances, 1, 1.06% Science advances 1 publication, 1.06%
Energy Conversion and Management	Energy Conversion and Management, 1, 1.06% Energy Conversion and Management 1 publication, 1.06%
Chinese Journal of Catalysis	Chinese Journal of Catalysis, 1, 1.06% Chinese Journal of Catalysis 1 publication, 1.06%
Trends in Chemistry	Trends in Chemistry, 1, 1.06% Trends in Chemistry 1 publication, 1.06%
Chinese Chemical Letters	Chinese Chemical Letters, 1, 1.06% Chinese Chemical Letters 1 publication, 1.06%
	1 2 3 4 5 6 7

Citations by publishers

	5 10 15 20 25
Wiley	Wiley, 23, 24.47% Wiley 23 publications, 24.47%
Elsevier	Elsevier, 18, 19.15% Elsevier 18 publications, 19.15%
American Chemical Society (ACS)	American Chemical Society (ACS), 15, 15.96% American Chemical Society (ACS) 15 publications, 15.96%
Springer Nature	Springer Nature, 13, 13.83% Springer Nature 13 publications, 13.83%
Royal Society of Chemistry (RSC)	Royal Society of Chemistry (RSC), 5, 5.32% Royal Society of Chemistry (RSC) 5 publications, 5.32%
International Union of Crystallography (IUCr)	International Union of Crystallography (IUCr), 4, 4.26% International Union of Crystallography (IUCr) 4 publications, 4.26%
Multidisciplinary Digital Publishing Institute (MDPI)	Multidisciplinary Digital Publishing Institute (MDPI), 3, 3.19% Multidisciplinary Digital Publishing Institute (MDPI) 3 publications, 3.19%
American Association for the Advancement of Science (AAAS)	American Association for the Advancement of Science (AAAS), 3, 3.19% American Association for the Advancement of Science (AAAS) 3 publications, 3.19%
Frontiers Media S.A.	Frontiers Media S.A., 1, 1.06% Frontiers Media S.A. 1 publication, 1.06%
IOP Publishing	IOP Publishing, 1, 1.06% IOP Publishing 1 publication, 1.06%
Proceedings of the National Academy of Sciences (PNAS)	Proceedings of the National Academy of Sciences (PNAS), 1, 1.06% Proceedings of the National Academy of Sciences (PNAS) 1 publication, 1.06%
eLife Sciences Publications	eLife Sciences Publications, 1, 1.06% eLife Sciences Publications 1 publication, 1.06%
Annual Reviews	Annual Reviews, 1, 1.06% Annual Reviews 1 publication, 1.06%
Chemical Industry Press	Chemical Industry Press, 1, 1.06% Chemical Industry Press 1 publication, 1.06%
	5 10 15 20 25

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Sorigué D. et al. Mechanism and dynamics of fatty acid photodecarboxylase // Science. 2021. Vol. 372. No. 6538. p. eabd5687.

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Sorigué D. et al. Mechanism and dynamics of fatty acid photodecarboxylase // Science. 2021. Vol. 372. No. 6538. p. eabd5687.

RIS |

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RIS Copy

TY - JOUR

DO - 10.1126/science.abd5687

UR - https://doi.org/10.1126%2Fscience.abd5687

TI - Mechanism and dynamics of fatty acid photodecarboxylase

T2 - Science

AU - Sorigué, Damien

AU - Hadjidemetriou, Kyprianos

AU - Blangy, Stéphanie

AU - Gotthard, Guillaume

AU - Bonvalet, A.

AU - Coquelle, N

AU - Samire, P

AU - Antonucci, L.

AU - Benachir, A

AU - Boutet, Sébastien

AU - Byrdin, Martin

AU - Cammarata, Marco

AU - Carbajo, S.

AU - Cuiné, Stephan

AU - Doak, R. B.

AU - Foucar, L.

AU - Gorel, Alexander

AU - Grünbein, M

AU - HARTMANN, E.

AU - Hienerwadel, Rainer

AU - Hilpert, Mario

AU - Kloos, M.

AU - Lane, T.M.

AU - Légeret, B

AU - Legrand, Pierre

AU - Li-Beisson, Yonghua

AU - Moulin, Solène

AU - Nurizzo, Didier

AU - Peltier, Gilles

AU - Schiró, G

AU - Shoeman, Robert

AU - Sliwa, M.

AU - Solinas, Xavier

AU - Zhuang, Bo

AU - Barends, Thomas R. M.

AU - Colletier, Jacques-Philippe

AU - Joffre, Manuel

AU - Royant, Antoine

AU - Berthomieu, Catherine

AU - Weik, Martin

AU - Domratcheva, Tatiana

AU - Brettel, Klaus

AU - Vos, Marten H.

AU - Schlichting, Ilme

AU - Arnoux, Pascal

AU - Müller, Pavel

AU - Beisson, Fred

AU - Aleksandrov, Alexey

PY - 2021

DA - 2021/04/09 00:00:00

PB - American Association for the Advancement of Science (AAAS)

SP - eabd5687

IS - 6538

VL - 372

SN - 0036-8075

SN - 1095-9203

ER -

BibTex |

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BibTex Copy

@article{2021_Sorigué,

author = {Damien Sorigué and Kyprianos Hadjidemetriou and Stéphanie Blangy and Guillaume Gotthard and A. Bonvalet and N Coquelle and P Samire and L. Antonucci and A Benachir and Sébastien Boutet and Martin Byrdin and Marco Cammarata and S. Carbajo and Stephan Cuiné and R. B. Doak and L. Foucar and Alexander Gorel and M Grünbein and E. HARTMANN and Rainer Hienerwadel and Mario Hilpert and M. Kloos and T.M. Lane and B Légeret and Pierre Legrand and Yonghua Li-Beisson and Solène Moulin and Didier Nurizzo and Gilles Peltier and G Schiró and Robert Shoeman and M. Sliwa and Xavier Solinas and Bo Zhuang and Thomas R. M. Barends and Jacques-Philippe Colletier and Manuel Joffre and Antoine Royant and Catherine Berthomieu and Martin Weik and Tatiana Domratcheva and Klaus Brettel and Marten H. Vos and Ilme Schlichting and Pascal Arnoux and Pavel Müller and Fred Beisson and Alexey Aleksandrov},

title = {Mechanism and dynamics of fatty acid photodecarboxylase},

journal = {Science},

year = {2021},

volume = {372},

publisher = {American Association for the Advancement of Science (AAAS)},

month = {apr},

url = {https://doi.org/10.1126%2Fscience.abd5687},

number = {6538},

pages = {eabd5687},

doi = {10.1126/science.abd5687}

}

MLA

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MLA Copy

Sorigué, Damien, et al. “Mechanism and dynamics of fatty acid photodecarboxylase.” Science, vol. 372, no. 6538, Apr. 2021, p. eabd5687. https://doi.org/10.1126%2Fscience.abd5687.

Found error?

Publisher

American Association for the Advancement of Science (AAAS)

Journal

Science

Quartile SCImago

Quartile WOS

Impact factor

56.9

ISSN

00368075 (Print)
10959203 (Electronic)

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