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Machine Learning Reinforced Genetic Algorithm for Massive Targeted Discovery of Selectively Cytotoxic Inorganic Nanoparticles

Publication typeJournal Article
Publication date2023-09-28
Journal: Small
Quartile SCImago
Q1
Quartile WOS
Q1
Impact factor13.3
ISSN16136810, 16136829
General Chemistry
Biotechnology
General Materials Science
Biomaterials
Abstract

Nanoparticles (NPs) have been employed as drug delivery systems (DDSs) for several decades, primarily as passive carriers, with limited selectivity. However, recent publications have shed light on the emerging phenomenon of NPs exhibiting selective cytotoxicity against cancer cell lines, attributable to distinct metabolic disparities between healthy and pathological cells. This study revisits the concept of NPs selective cytotoxicity, and for the first time proposes a high‐throughput in silico screening approach to massive targeted discovery of selectively cytotoxic inorganic NPs. In the first step, this work trains a gradient boosting regression model to predict viability of NP‐treated cell lines. The model achieves mean cross‐validation (CV) Q2 = 0.80 and root mean square error (RMSE) of 13.6. In the second step, this work develops a machine learning (ML) reinforced genetic algorithm (GA), capable of screening >14 900 candidates/min, to identify the best‐performing selectively cytotoxic NPs. As proof‐of‐concept, DDS candidates for the treatment of liver cancer are screened on HepG2 and hepatocytes cell lines resulting in Ag NPs with selective toxicity score of 42%. This approach opens the door for clinical translation of NPs, expanding their therapeutic application to a wider range of chemical space of NPs and living organisms such as bacteria and fungi.

Citations by journals

1
European Journal of Medicinal Chemistry
European Journal of Medicinal Chemistry, 1, 100%
European Journal of Medicinal Chemistry
1 publication, 100%
1

Citations by publishers

1
Elsevier
Elsevier, 1, 100%
Elsevier
1 publication, 100%
1
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Jyakhwo S. et al. Machine Learning Reinforced Genetic Algorithm for Massive Targeted Discovery of Selectively Cytotoxic Inorganic Nanoparticles // Small. 2023.
GOST all authors (up to 50) Copy
Jyakhwo S., Serov N., Dmitrenko A., Vinogradov V. Machine Learning Reinforced Genetic Algorithm for Massive Targeted Discovery of Selectively Cytotoxic Inorganic Nanoparticles // Small. 2023.
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RIS Copy
TY - JOUR
DO - 10.1002/smll.202305375
UR - https://doi.org/10.1002%2Fsmll.202305375
TI - Machine Learning Reinforced Genetic Algorithm for Massive Targeted Discovery of Selectively Cytotoxic Inorganic Nanoparticles
T2 - Small
AU - Jyakhwo, Susan
AU - Serov, Nikita
AU - Dmitrenko, Andrei
AU - Vinogradov, Vladimir
PY - 2023
DA - 2023/09/28 00:00:00
PB - Wiley
SN - 1613-6810
SN - 1613-6829
ER -
BibTex
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@article{2023_Jyakhwo,
author = {Susan Jyakhwo and Nikita Serov and Andrei Dmitrenko and Vladimir Vinogradov},
title = {Machine Learning Reinforced Genetic Algorithm for Massive Targeted Discovery of Selectively Cytotoxic Inorganic Nanoparticles},
journal = {Small},
year = {2023},
publisher = {Wiley},
month = {sep},
url = {https://doi.org/10.1002%2Fsmll.202305375},
doi = {10.1002/smll.202305375}
}
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