volume 1111 pages 142-150

Solid state and dynamic solution structures of O-carbamidine amidoximes gives further insight into the mechanism of zinc(II)-mediated generation of 1,2,4-oxadiazoles

Publication typeJournal Article
Publication date2016-05-01
scimago Q2
wos Q2
SJR0.628
CiteScore8.0
Impact factor4.7
ISSN00222860, 18728014
Organic Chemistry
Inorganic Chemistry
Spectroscopy
Analytical Chemistry
Abstract
Three new iminium salts [H2N C(R)ON C(R′)NH2](p-TolSO3)·½H2O ([1–3](p-TolSO3)·½H2O; R/R′ = NMe2/PhCH2 1, NMe2/p-BrC6H4 2, N(CH2)5/p-BrC6H4 3) were synthesized via ZnII-mediated amidoxime-cyanamide coupling and their solid structures were studied by X-ray diffraction. Solution structure and conformational changes of [1–3](p-TolSO3)·½H2O were studied by dynamic NMR. The obtained quantitative data were supported by DFT calculations. All the obtained results help to understand the relative stability of the salts [H2N C(R)ON C(R′)NH2](X) (R = NAlk2, Alk, Ar) and give a further insight into the mechanism of ZnII-mediated generation of 1,2,4-oxadiazoles. The electron delocalization and sesquialteral bonds in the [H2N C(NR2)ON C(R′)NH2]+ system was recognized by estimation of values of activation energy barriers (14–18 kcal/mol by DNMR and 16–17 kcal/mol by DFT calculations) for the rotation around the CN bonds for the NR2 groups and inspection of the solid-state X-ray data along with the Wiberg bond indices (intermediate single/double bond order for the CN distances). This electron delocalization is responsible for the stabilization of the positively charged iminium cation. The moderate strength hydrogen bonding between the oxime N atom and the =NH2 group, which is verified from the X-ray, DNMR experiments, and by using quantum chemical calculations, stabilizes the iminium salt, but it is still weak to prevent the heterocyclization. Theoretical calculations of the heterocyclization of [H2N C(R)ON C(R′)NH2]+ to 1,2,4-oxadiazoles demonstrated that it is kinetically hindered to a greater extent for R = NAlk2 and this explains their lower reactivity as compared to the iminium salts with R = Alk, Ar.
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Kulish K. I. et al. Solid state and dynamic solution structures of O-carbamidine amidoximes gives further insight into the mechanism of zinc(II)-mediated generation of 1,2,4-oxadiazoles // Journal of Molecular Structure. 2016. Vol. 1111. pp. 142-150.
GOST all authors (up to 50) Copy
Kulish K. I., Novikov A. S., Tolstoy P. M., Venter G. J. S., Bokach N. A., Zolotarev A. A., Kukushkin V. Y. Solid state and dynamic solution structures of O-carbamidine amidoximes gives further insight into the mechanism of zinc(II)-mediated generation of 1,2,4-oxadiazoles // Journal of Molecular Structure. 2016. Vol. 1111. pp. 142-150.
RIS |
Cite this
RIS Copy
TY - JOUR
DO - 10.1016/j.molstruc.2016.01.038
UR - https://doi.org/10.1016/j.molstruc.2016.01.038
TI - Solid state and dynamic solution structures of O-carbamidine amidoximes gives further insight into the mechanism of zinc(II)-mediated generation of 1,2,4-oxadiazoles
T2 - Journal of Molecular Structure
AU - Kulish, Kirill I
AU - Novikov, Alexander S.
AU - Tolstoy, Peter M.
AU - Venter, Gertruida J. S.
AU - Bokach, Nadezhda A.
AU - Zolotarev, A. A.
AU - Kukushkin, Vadim Yu.
PY - 2016
DA - 2016/05/01
PB - Elsevier
SP - 142-150
VL - 1111
SN - 0022-2860
SN - 1872-8014
ER -
BibTex
Cite this
BibTex (up to 50 authors) Copy
@article{2016_Kulish,
author = {Kirill I Kulish and Alexander S. Novikov and Peter M. Tolstoy and Gertruida J. S. Venter and Nadezhda A. Bokach and A. A. Zolotarev and Vadim Yu. Kukushkin},
title = {Solid state and dynamic solution structures of O-carbamidine amidoximes gives further insight into the mechanism of zinc(II)-mediated generation of 1,2,4-oxadiazoles},
journal = {Journal of Molecular Structure},
year = {2016},
volume = {1111},
publisher = {Elsevier},
month = {may},
url = {https://doi.org/10.1016/j.molstruc.2016.01.038},
pages = {142--150},
doi = {10.1016/j.molstruc.2016.01.038}
}