Electron Attachment to DNA: The Protective Role of Amino Acids
Publication type: Journal Article
Publication date: 2023-03-07
scimago Q2
wos Q2
SJR: 0.634
CiteScore: 4.8
Impact factor: 2.8
ISSN: 10895639, 15205215
PubMed ID:
36881498
Physical and Theoretical Chemistry
Abstract
We have studied the effect of amino acids on the electron attachment properties of a DNA nucleobase, with cytosine as a model system. The equation of motion coupled cluster theory with an extended basis set has been used to simulate the electron-attached state of the DNA model system. Arginine, alanine, lysine, and glycine are the four amino acids considered to investigate their role in electron attachment to a DNA nucleobase. The electron attachment to cytosine in all the four cytosine–amino acid gas-phase dimer complexes follows a doorway mechanism, where the electron gets transferred from the initial dipole-bound doorway state to the final nucleobase-bound state through the mixing of electronic and nuclear degrees of freedom. When cytosine is bulk-solvated with glycine, the glycine-bound state acts as the doorway state, where the initial electron density is localized on the bulk amino acid and away from the nucleobase, thus leading to the physical shielding of the nucleobase from the incoming electron. At the same time, the presence of amino acids can increase the stability of the nucleobase-bound anionic state, which can suppress the sugar–phosphate bond rupture caused by dissociative electron attachment to DNA.
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Citations from 2024:
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Verma P., Narayanan S J J., Dutta A. K. Electron Attachment to DNA: The Protective Role of Amino Acids // Journal of Physical Chemistry A. 2023. Vol. 127. No. 10. pp. 2215-2227.
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Verma P., Narayanan S J J., Dutta A. K. Electron Attachment to DNA: The Protective Role of Amino Acids // Journal of Physical Chemistry A. 2023. Vol. 127. No. 10. pp. 2215-2227.
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TY - JOUR
DO - 10.1021/acs.jpca.2c06624
UR - https://pubs.acs.org/doi/10.1021/acs.jpca.2c06624
TI - Electron Attachment to DNA: The Protective Role of Amino Acids
T2 - Journal of Physical Chemistry A
AU - Verma, Pooja
AU - Narayanan S J, Jishnu
AU - Dutta, Achintya K.
PY - 2023
DA - 2023/03/07
PB - American Chemical Society (ACS)
SP - 2215-2227
IS - 10
VL - 127
PMID - 36881498
SN - 1089-5639
SN - 1520-5215
ER -
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BibTex (up to 50 authors)
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@article{2023_Verma,
author = {Pooja Verma and Jishnu Narayanan S J and Achintya K. Dutta},
title = {Electron Attachment to DNA: The Protective Role of Amino Acids},
journal = {Journal of Physical Chemistry A},
year = {2023},
volume = {127},
publisher = {American Chemical Society (ACS)},
month = {mar},
url = {https://pubs.acs.org/doi/10.1021/acs.jpca.2c06624},
number = {10},
pages = {2215--2227},
doi = {10.1021/acs.jpca.2c06624}
}
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MLA
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Verma, Pooja, et al. “Electron Attachment to DNA: The Protective Role of Amino Acids.” Journal of Physical Chemistry A, vol. 127, no. 10, Mar. 2023, pp. 2215-2227. https://pubs.acs.org/doi/10.1021/acs.jpca.2c06624.