volume 121 issue 28 pages 5301-5312

Effective Fragment Potential Method for H-Bonding: How To Obtain Parameters for Nonrigid Fragments

Publication typeJournal Article
Publication date2017-07-06
scimago Q2
wos Q2
SJR0.634
CiteScore4.8
Impact factor2.8
ISSN10895639, 15205215
Physical and Theoretical Chemistry
Abstract
Accuracy of the effective fragment potential (EFP) method was explored for describing intermolecular interaction energies in three dimers with strong H-bonded interactions, formic acid, formamide, and formamidine dimers, which are a part of HBC6 database of noncovalent interactions. Monomer geometries in these dimers change significantly as a function of intermonomer separation. Several EFP schemes were considered, in which fragment parameters were prepared for a fragment in its gas-phase geometry or recomputed for each unique fragment geometry. Additionally, a scheme in which gas-phase fragment parameters are shifted according to relaxed fragment geometries is introduced and tested. EFP data are compared against the coupled cluster with single, double, and perturbative triple excitations (CCSD(T)) method in a complete basis set (CBS) and the symmetry adapted perturbation theory (SAPT). All considered EFP schemes provide a good agreement with CCSD(T)/CBS for binding energies at equilibrium separations, with discrepancies not exceeding 2 kcal/mol. However, only the schemes that utilize relaxed fragment geometries remain qualitatively correct at shorter than equilibrium intermolecular distances. The EFP scheme with shifted parameters behaves quantitatively similar to the scheme in which parameters are recomputed for each monomer geometry and thus is recommended as a computationally efficient approach for large-scale EFP simulations of flexible systems.
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Dubinets N. O., Slipchenko L. V. Effective Fragment Potential Method for H-Bonding: How To Obtain Parameters for Nonrigid Fragments // Journal of Physical Chemistry A. 2017. Vol. 121. No. 28. pp. 5301-5312.
GOST all authors (up to 50) Copy
Dubinets N. O., Slipchenko L. V. Effective Fragment Potential Method for H-Bonding: How To Obtain Parameters for Nonrigid Fragments // Journal of Physical Chemistry A. 2017. Vol. 121. No. 28. pp. 5301-5312.
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RIS Copy
TY - JOUR
DO - 10.1021/acs.jpca.7b01701
UR - https://doi.org/10.1021/acs.jpca.7b01701
TI - Effective Fragment Potential Method for H-Bonding: How To Obtain Parameters for Nonrigid Fragments
T2 - Journal of Physical Chemistry A
AU - Dubinets, Nikita O
AU - Slipchenko, Lyudmila V.
PY - 2017
DA - 2017/07/06
PB - American Chemical Society (ACS)
SP - 5301-5312
IS - 28
VL - 121
PMID - 28587456
SN - 1089-5639
SN - 1520-5215
ER -
BibTex |
Cite this
BibTex (up to 50 authors) Copy
@article{2017_Dubinets,
author = {Nikita O Dubinets and Lyudmila V. Slipchenko},
title = {Effective Fragment Potential Method for H-Bonding: How To Obtain Parameters for Nonrigid Fragments},
journal = {Journal of Physical Chemistry A},
year = {2017},
volume = {121},
publisher = {American Chemical Society (ACS)},
month = {jul},
url = {https://doi.org/10.1021/acs.jpca.7b01701},
number = {28},
pages = {5301--5312},
doi = {10.1021/acs.jpca.7b01701}
}
MLA
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Dubinets, Nikita O., et al. “Effective Fragment Potential Method for H-Bonding: How To Obtain Parameters for Nonrigid Fragments.” Journal of Physical Chemistry A, vol. 121, no. 28, Jul. 2017, pp. 5301-5312. https://doi.org/10.1021/acs.jpca.7b01701.