volume 53 issue 1 pages 65-75

Trans-ancestry genome-wide association meta-analysis of prostate cancer identifies new susceptibility loci and informs genetic risk prediction

David V. Conti 1
Burcu Darst 1
Lilit C Moss 1
Edward J. Saunders 2
XIN SHENG 1
Alisha Chou 1
Fredrick Schumacher 3, 4
Ali Amin Al Olama 5, 6
Sara Benlloch 5
Tokhir Dadaev 2
M. Brook 2
Ali Sahimi 1
Thomas J. Hoffmann 7, 8
Atsushi Takahashi 9, 10
Koichi Matsuda 11, 12
Yukihide Momozawa 13
Masashi Fujita 14
K. T. Muir 15, 16
Artitaya Lophatananon 15
Peggy Wan 1
Loïc Le Marchand 17
Lynne R. Wilkens 17
Victoria L. Stevens 18
Susan M. Gapstur 18
Brian D. Carter 18
Johanna Schleutker 19, 20
Teuvo L.J. Tammela 21
Csilla Sipeky 19
Anssi Auvinen 22
G. R. Giles 23, 24, 25
Melissa C. Southey 25
Robert J. MacInnis 23, 24
Cezary Cybulski 26
Dominika Wokołorczyk 26
Jan Lubinski 26
DAVID E. NEAL 27, 28, 29
Jenny L. Donovan 30
Freddie C. Hamdy 31, 32
Richard C. Martin 30, 33, 34
Børge G. Nordestgaard 35, 36
Sune F. Nielsen 35, 36
Maren Weischer 36
Stig Egil Bojesen 35, 36
Peter Iversen 37
Jyotsna Batra 38, 39
Suzanne Chambers 40
Leire Moya 38, 39
Lisa Horvath 41, 42
Judith A. Clements 38, 39
W. Tilley 43
Gail Risbridger 44, 45
Henrik Grönberg 46
Markus Aly 46, 47, 48
Robert Szulkin 46, 49
Martin Eklund 46
Tobias Nordström 46, 50
Nora Pashayan 51, 52
ALISON DUNNING 52
Maya Ghoussaini 53
Ruth C. Travis 54
Tim J Key 54
Elio Riboli 55
Jong Y. Park 56
Thomas A. Sellers 56
Hui-Yi Lin 57
Demetrius Albanes 58
S L Weinstein 58
Lorelei A. Mucci 59
Edward Giovannucci 59
Sara Lindström 60
Peter Kraft 61
David J. Hunter 62
Kathryn L. Penney 63
Constance Turman 61
Catherine M. Tangen 64
Phyllis J. Goodman 64
Ian M. Thompson 65
Robert J. Hamilton 66, 67
Neil E. Fleshner 66
Antonio Finelli 68
Marie-Elise Parent 69, 70
Janet L. Stanford 71, 72
ELAINE OSTRANDER 73
Milan S. Geybels 71
Stella Koutros 58
Laura E Beane Freeman 58
Meir Stampfer 63
Alicja Wolk 74, 75
Niclas Håkansson 74
Gerald L. Andriole 76
Robert N Hoover 58
Mitchell J. Machiela 58
Karina Meden Sørensen 77, 78
Michael Borre 78, 79
William J. Blot 80, 81
Wei Zheng 80
Edward D Yeboah 82, 83
James E. Mensah 82, 83
Yong-Jie Lu 84
Hong-Wei Zhang 85
Ninghan Feng 86
Xueying Mao 84
Wu Yudong 87
Shan‐Chao Zhao 88
Zan Sun 89
Stephen N. Thibodeau 90
Shannon K. McDonnell 91
Daniel J. Schaid 91
Catharine ML West 92
Neil Burnet 93
Gill Barnett 94
Christiane Maier 95
Thomas Schnoeller 96
Manuel Luedeke 97
Adam S. Kibel 98
Bettina F Drake 76
Olivier Cussenot 99
Géraldine Cancel-Tassin 99, 100
Florence Menegaux 101
Thérèse Truong 101
Yves Akoli Koudou 102
Esther M. John 103
Eli Marie Grindedal 104
Lovise Maehle 104
Kay-Tee Khaw 105
Sue A. Ingles 106
Mariana C. Stern 106
Ana Lydia Vega 107, 108, 109
Antonio Gómez-Caamaño 110
Laura Fachal 5, 107, 108, 109
Barry S. Rosenstein 111, 112
Sarah L. Kerns 113
Harry Ostrer 114
Manuel R. Teixeira 115, 116
Paulo Paula 115, 117
Andreia Brandão 115, 117
Stephen Watya 118
Alexander Lubwama 118
Jeannette T. Bensen 119, 120
Elizabeth T. H. Fontham 58
James Mohler 120, 121
Jack A. Taylor 122, 123
Manolis Kogevinas 124, 125, 126, 127
Javier Llorca 127, 128
Gemma Castaño-Vinyals 124, 125, 126, 127
Lisa A. Cannon Albright 129, 130
Craig C. Teerlink 129, 130
Chad D Huff 131
Sara S. Strom 131
L. Multigner 132
Pascal Blanchet 133
Brureau Laurent 133
Radka Kaneva 134
Chavdar Slavov 135
Vanio Mitev 134
Robin J. Leach 136
Brandi Weaver 136
Hermann Brenner 137, 138, 139
Katarina Cuk 137
Bernd Holleczek 140
Kai-Uwe Saum 137
Eric A. Klein 141, 142
Ann W. Hsing 143
Rick A. Kittles 144
Adam B. Murphy 145
CHRISTOPHER J. LOGOTHETIS 146
Jeri Kim 146
Susan L. Neuhausen 147
Linda Steele 147
Yuan Chun Ding 147
William B. Isaacs 148
Barbara Nemesure 149
Anselm J.M. Hennis 149, 150
John Carpten 151
Hardev Pandha 152
A. J. Michael 152
Kim De Ruyck 153
Gert De Meerleer 154
Piet Ost 154
Jianfeng Xu 155
Azad Razack 156
Jasmine Lim 156
Soo-Hwang Teo 157
Lisa F. Newcomb 72, 158
Daniel W Lin 72, 158
Jay H. Fowke 159
Christine Neslund-Dudas 160
Benjamin A. Rybicki 160
Marija Gamulin 161
Davor Lessel 162
Tomislav Kulis 163
Nawaid Usmani 164, 165
Sandeep Singhal 164
Matthew Parliament 164, 165
Frank CLAESSENS 166
Steven Joniau 167
Thomas Van den Broeck 166, 167
Manuela Gago-Dominguez 168, 169
Jose Esteban Castelao 170
Maria Elena Martinez 171
Samantha Larkin 172
Paul A. TOWNSEND 152, 173
Claire Aukim Hastie 152
William H. Bush 174
Melinda C. Aldrich 175
Dana C. Crawford 174
Shiv Srivastava 176
Jennifer C Cullen 176
Gyorgy Petrovics 176
Graham Casey 177
Monique J. Roobol 178
Guido Jenster 178
Ron H. N. van Schaik 179
Jennifer J. Hu 180
Maureen Sanderson 181
Rohit Varma 182
Roberta McKean-Cowdin 1
Mina Torres 182
Nicholas Mancuso 1
Sonja I Berndt 58
Stephen K. Van Den Eeden 183, 184
STEPHEN CHANOCK 58
Michael B. Cook 58
Fredrik Wiklund 46
Hidewaki Nakagawa 14
John S Witte 7, 8, 184
Rosalind Eeles 2, 185
Zsofia Kote-Jarai 2
Christopher Haiman 1
2
 
the Institute of Cancer Research, London, UK
4
 
Seidman Cancer Center, University Hospitals, Cleveland, USA
12
 
Biobank, Tokyo, Japan
41
 
Chris O’Brien Lifehouse (COBLH), Camperdown, Sydney, Australia
49
 
SDS Life Science, Danderyd, Sweden
65
 
CHRISTUS Santa Rosa Hospital – Medical Center, San Antonio, USA
81
 
International Epidemiology Institute, Rockville, USA
95
 
Humangenetik Tuebingen, Tuebingen, Germany
97
 
genetikum, Neu-Ulm, Germany
100
 
CeRePP, Tenon Hospital, Paris, France
107
 
Fundación Pública Galega Medicina Xenómica, Santiago De Compostela, Spain
108
 
Instituto de Investigación Sanitaria de Santiago de Compostela, Santiago de Compostela, Spain
118
 
Uro Care, Kampala, Uganda
121
 
Department of Urology, Roswell Park Cancer Institute, Buffalo, USA
130
 
George E. Wahlen Department of Veterans Affairs Medical Center, Salt Lake City, USA
140
 
Saarland cancer registry, Saarbrücken, Germany
155
 
Program for Personalized Cancer Care and Department of Surgery, NorthShore University HealthSystem, Evanston, USA
157
 
Cancer Research Malaysia (CRM), Outpatient Centre, Subang Jaya Medical Centre, Subang Jaya, Malaysia
160
 
Department of Public Health Sciences, Henry Ford Hospital, Detroit, USA
165
 
Division of Radiation Oncology, Cross Cancer Institute, Edmonton, Canada
170
 
Genetic Oncology Unit, CHUVI Hospital, Complexo Hospitalario Universitario de Vigo, Instituto de Investigación Biomédica Galicia Sur (IISGS), Vigo, Spain
181
 
Department of Family and Community Medicine, Meharry Medical College, Nashville, USA
182
 
Southern California Eye Institute, CHA Hollywood Presbyterian Medical Center, Los Angeles, USA
183
 
Division of Research, Kaiser Permanente, Northern California, Oakland, USA
185
 
Royal Marsden NHS Foundation Trust, London, UK
Publication typeJournal Article
Publication date2021-01-04
scimago Q1
wos Q1
SJR16.586
CiteScore45.1
Impact factor29.0
ISSN10614036, 15461718
Genetics
Abstract
Prostate cancer is a highly heritable disease with large disparities in incidence rates across ancestry populations. We conducted a multiancestry meta-analysis of prostate cancer genome-wide association studies (107,247 cases and 127,006 controls) and identified 86 new genetic risk variants independently associated with prostate cancer risk, bringing the total to 269 known risk variants. The top genetic risk score (GRS) decile was associated with odds ratios that ranged from 5.06 (95% confidence interval (CI), 4.84–5.29) for men of European ancestry to 3.74 (95% CI, 3.36–4.17) for men of African ancestry. Men of African ancestry were estimated to have a mean GRS that was 2.18-times higher (95% CI, 2.14–2.22), and men of East Asian ancestry 0.73-times lower (95% CI, 0.71–0.76), than men of European ancestry. These findings support the role of germline variation contributing to population differences in prostate cancer risk, with the GRS offering an approach for personalized risk prediction. A meta-analysis of genome-wide association studies across different populations highlights new risk loci and provides a genetic risk score that can stratify prostate cancer risk across ancestries.
Found 
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Conti D. V. et al. Trans-ancestry genome-wide association meta-analysis of prostate cancer identifies new susceptibility loci and informs genetic risk prediction // Nature Genetics. 2021. Vol. 53. No. 1. pp. 65-75.
GOST all authors (up to 50) Copy
Conti D. V. et al. Trans-ancestry genome-wide association meta-analysis of prostate cancer identifies new susceptibility loci and informs genetic risk prediction // Nature Genetics. 2021. Vol. 53. No. 1. pp. 65-75.
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BibTex (up to 50 authors) Copy
@article{2021_Conti,
author = {David V. Conti and Burcu Darst and Lilit C Moss and Edward J. Saunders and XIN SHENG and Alisha Chou and Fredrick Schumacher and Ali Amin Al Olama and Sara Benlloch and Tokhir Dadaev and M. Brook and Ali Sahimi and Thomas J. Hoffmann and Atsushi Takahashi and Koichi Matsuda and Yukihide Momozawa and Masashi Fujita and K. T. Muir and Artitaya Lophatananon and Peggy Wan and Loïc Le Marchand and Lynne R. Wilkens and Victoria L. Stevens and Susan M. Gapstur and Brian D. Carter and Johanna Schleutker and Teuvo L.J. Tammela and Csilla Sipeky and Anssi Auvinen and G. R. Giles and Melissa C. Southey and Robert J. MacInnis and Cezary Cybulski and Dominika Wokołorczyk and Jan Lubinski and DAVID E. NEAL and Jenny L. Donovan and Freddie C. Hamdy and Richard C. Martin and Børge G. Nordestgaard and Sune F. Nielsen and Maren Weischer and Stig Egil Bojesen and Martin Andreas Røder and Peter Iversen and Jyotsna Batra and Suzanne Chambers and Leire Moya and Lisa Horvath and Judith A. Clements and others},
title = {Trans-ancestry genome-wide association meta-analysis of prostate cancer identifies new susceptibility loci and informs genetic risk prediction},
journal = {Nature Genetics},
year = {2021},
volume = {53},
publisher = {Springer Nature},
month = {jan},
url = {https://doi.org/10.1038/s41588-020-00748-0},
number = {1},
pages = {65--75},
doi = {10.1038/s41588-020-00748-0}
}
MLA
Cite this
MLA Copy
Conti, David V., et al. “Trans-ancestry genome-wide association meta-analysis of prostate cancer identifies new susceptibility loci and informs genetic risk prediction.” Nature Genetics, vol. 53, no. 1, Jan. 2021, pp. 65-75. https://doi.org/10.1038/s41588-020-00748-0.