Ontogeny Dictates Oncogenic Potential, Lineage Hierarchy, and Therapy Response in Pediatric Leukemia

Ke Wang
Shayan Saniei
Nikita Poddar
Subrina Autar
Saul Carcamo
Meghana Sreenath
Jack H Peplinski
Rhonda E. Ries
Isabella G. Martinez
Clifford Chao
Anna Huo-Chang Mei
Noshin Rahman
Levan Mekerishvili
Miguel Quijada-Álamo
Grace Freed
Mimi Zhang
Katherine Lachman
Zayna Diaz
Manuel M Gonzalez
Jing Zhang
Giang Pham
Dan Filipescu
Mirela Berisa
Tommaso Balestra
Julie A. Reisz
A. D'Alessandro
Daniel J. Puleston
Emily Bernstein
Jerry Edward Chipuk
Mark Wunderlich
Sarah K. Tasian
Bridget K. Marcellino
Ian A Glass
Christopher M Sturgeon
Dan A Landau
Zhihong Chen
Eirini P. Papapetrou
Franco Izzo
Soheil Meshinchi
Dan Hasson
Elvin Wagenblast
Publication typePosted Content
Publication date2025-03-20
Abstract
Summary

Accumulating evidence links pediatric cancers to prenatal transformation events, yet the influence of the developmental stage on oncogenesis remains elusive. We investigated how hematopoietic stem cell developmental stages affect leukemic transformation, disease progression, and therapy response using a novel, humanized model of NUP98::NSD1-driven pediatric acute myeloid leukemia, that is particularly aggressive with WT1 co-mutations. Fetal-derived hematopoietic stem cells readily transform into leukemia, andWT1mutations further enhance stemness and alter lineage hierarchy. In contrast, stem cells from later developmental stages become progressively resistant to transformation. Single-cell analyses revealed that fetal-origin leukemia stem cells exhibit greater quiescence and reliance on oxidative phosphorylation than their postnatal counterparts. These differences drive distinct therapeutic responses, despite identical oncogenic mutations. In patients, onco-fetal transcriptional programs correlate with worse outcomes. By targeting key vulnerabilities of fetal-origin leukemia cells, we identified combination therapies that significantly reduce aggressiveness, highlighting the critical role of ontogeny in pediatric cancer treatment.

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