Super-resolution chromatin tracing reveals domains and cooperative interactions in single cells
Imaging chromatin spatial organization
The genome is organized within the nucleus as three-dimensional domains that modulate DNA-templated processes. Bintu et al. used high-throughput Oligopaint labeling and imaging to observe chromatin dynamics inside the nuclei of several different mammalian cell lines. After combining the datasets, single-cell matrices revealed chromatin arranged in topologically associating domains (TADs). Removing cohesin resulted in a loss of aggregate TADs among populations of cells, but specific TADs were still detected at the single-cell level. Furthermore, higher-order organization was detected, suggestive of cooperative interactions within the genome.
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Top-30
Journals
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5
10
15
20
25
30
35
40
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Nature Communications
40 publications, 4.43%
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Molecular Cell
27 publications, 2.99%
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Current Opinion in Genetics and Development
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Nucleic Acids Research
19 publications, 2.1%
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Science advances
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Genome Biology
17 publications, 1.88%
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Nature Genetics
17 publications, 1.88%
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bioRxiv
17 publications, 1.88%
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Methods in Molecular Biology
16 publications, 1.77%
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Nature Methods
15 publications, 1.66%
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Current Opinion in Cell Biology
15 publications, 1.66%
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Nature
14 publications, 1.55%
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Biophysical Journal
12 publications, 1.33%
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Current Opinion in Structural Biology
12 publications, 1.33%
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PLoS Computational Biology
12 publications, 1.33%
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Cell
11 publications, 1.22%
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Cell Reports
11 publications, 1.22%
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eLife
11 publications, 1.22%
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Journal of Molecular Biology
10 publications, 1.11%
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Proceedings of the National Academy of Sciences of the United States of America
10 publications, 1.11%
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Nature Reviews Genetics
9 publications, 1%
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Journal of Chemical Physics
8 publications, 0.89%
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Computational and Structural Biotechnology Journal
8 publications, 0.89%
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Nature Reviews Molecular Cell Biology
7 publications, 0.78%
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Trends in Genetics
6 publications, 0.66%
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Genes
6 publications, 0.66%
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Frontiers in Genetics
6 publications, 0.66%
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Frontiers in Immunology
6 publications, 0.66%
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Nature Protocols
6 publications, 0.66%
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35
40
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Publishers
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50
100
150
200
250
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Cold Spring Harbor Laboratory
216 publications, 23.92%
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Springer Nature
205 publications, 22.7%
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Elsevier
189 publications, 20.93%
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Wiley
37 publications, 4.1%
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Oxford University Press
35 publications, 3.88%
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American Association for the Advancement of Science (AAAS)
24 publications, 2.66%
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Frontiers Media S.A.
22 publications, 2.44%
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MDPI
21 publications, 2.33%
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Public Library of Science (PLoS)
17 publications, 1.88%
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eLife Sciences Publications
11 publications, 1.22%
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Annual Reviews
11 publications, 1.22%
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Proceedings of the National Academy of Sciences (PNAS)
10 publications, 1.11%
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AIP Publishing
9 publications, 1%
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American Physical Society (APS)
8 publications, 0.89%
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Royal Society of Chemistry (RSC)
8 publications, 0.89%
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Portland Press
7 publications, 0.78%
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American Chemical Society (ACS)
7 publications, 0.78%
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The Company of Biologists
6 publications, 0.66%
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Taylor & Francis
6 publications, 0.66%
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Pleiades Publishing
5 publications, 0.55%
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Rockefeller University Press
4 publications, 0.44%
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American Society for Cell Biology (ASCB)
3 publications, 0.33%
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Korean Society for Biochemistry and Molecular Biology - BMB Reports
3 publications, 0.33%
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Science in China Press
3 publications, 0.33%
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F1000 Research
2 publications, 0.22%
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IOP Publishing
2 publications, 0.22%
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Canadian Science Publishing
1 publication, 0.11%
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Environmental Health Perspectives
1 publication, 0.11%
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Mary Ann Liebert
1 publication, 0.11%
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50
100
150
200
250
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- We do not take into account publications without a DOI.
- Statistics recalculated weekly.