Lineage tracing on transcriptional landscapes links state to fate during differentiation
Mapping cell fate during hematopoiesis
Biologists have long attempted to understand how stem and progenitor cells in regenerating and embryonic tissues differentiate into mature cell types. Through the use of recent technical advances to sequence the genes expressed in thousands of individual cells, differentiation mechanisms are being revealed. Weinreb et al. extended these methods to track clones of cells (cell families) across time. Their approach reveals differences in cellular gene expression as cells progress through hematopoiesis, which is the process of blood production. Using machine learning, they tested how well gene expression measurements account for the choices that cells make. This work reveals that a considerable gap still exists in understanding differentiation mechanisms, and future methods are needed to fully understand—and ultimately control—cell differentiation.
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Top-30
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5
10
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25
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Nature Communications
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International Journal of Molecular Sciences
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Nature Methods
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Cell Stem Cell
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Cell Reports
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iScience
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eLife
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bioRxiv
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Nature Biotechnology
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Nature Reviews Genetics
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Current Opinion in Hematology
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Nature Immunology
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Immunity
6 publications, 1.01%
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Stem Cell Reports
6 publications, 1.01%
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Bioinformatics
6 publications, 1.01%
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Cells
5 publications, 0.84%
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Genome Biology
5 publications, 0.84%
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Developmental Cell
5 publications, 0.84%
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Science advances
5 publications, 0.84%
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25
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Publishers
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20
40
60
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100
120
140
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Cold Spring Harbor Laboratory
140 publications, 23.49%
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Springer Nature
136 publications, 22.82%
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Elsevier
131 publications, 21.98%
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Wiley
23 publications, 3.86%
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MDPI
23 publications, 3.86%
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Frontiers Media S.A.
21 publications, 3.52%
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Oxford University Press
19 publications, 3.19%
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American Society of Hematology
11 publications, 1.85%
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The Company of Biologists
9 publications, 1.51%
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Ovid Technologies (Wolters Kluwer Health)
9 publications, 1.51%
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American Association for the Advancement of Science (AAAS)
8 publications, 1.34%
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eLife Sciences Publications
8 publications, 1.34%
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Annual Reviews
7 publications, 1.17%
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Public Library of Science (PLoS)
4 publications, 0.67%
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Rockefeller University Press
4 publications, 0.67%
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Portland Press
3 publications, 0.5%
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American Chemical Society (ACS)
3 publications, 0.5%
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Proceedings of the National Academy of Sciences (PNAS)
3 publications, 0.5%
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American Association for Cancer Research (AACR)
3 publications, 0.5%
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Royal Society of Chemistry (RSC)
2 publications, 0.34%
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European Molecular Biology Organization
2 publications, 0.34%
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The Royal Society
2 publications, 0.34%
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American Society for Clinical Investigation
2 publications, 0.34%
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American Physical Society (APS)
2 publications, 0.34%
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IOP Publishing
1 publication, 0.17%
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Institute of Electrical and Electronics Engineers (IEEE)
1 publication, 0.17%
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Korean Society for Stem Cell Research
1 publication, 0.17%
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Walter de Gruyter
1 publication, 0.17%
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Life Science Alliance, LLC
1 publication, 0.17%
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20
40
60
80
100
120
140
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- We do not take into account publications without a DOI.
- Statistics recalculated weekly.