NAD+-Dependent Formate Dehydrogenase from Themotolerant Yeast Ogataea parapolymorpha: Properties and Protein Engineering of the N-Terminal Sequence
Anastasia A Pometun
1, 2
,
Leonid A Shaposhnikov
1, 2
,
Sofiya A. Zubanova
2
,
Rostislav P. Kovalevskii
2
,
Denis L Atroshenko
1, 2
,
Svyatoslav S Savin
2
,
Vladimir I. TISHKOV
1, 2
1
Publication type: Journal Article
Publication date: 2023-09-22
scimago Q2
wos Q4
SJR: 0.659
CiteScore: 3.8
Impact factor: 2.2
ISSN: 00062979, 16083040
PubMed ID:
37770404
Biochemistry
General Medicine
Biophysics
Geriatrics and Gerontology
Biochemistry, Genetics and Molecular Biology (miscellaneous)
Abstract
Previously, the gene of formate dehydrogenase (FDH, EC 1.2.1.2) from the thermotolerant methylotrophic yeast Ogataea parapolymorpha DL 1 (OpaFDH) was cloned in our laboratory. Recombinant enzyme with additional glycine amino acid residue (OpaFDH_GK) was obtained in Escherichia coli cells in active and soluble form with a yield of more than 1 g per liter of the medium. In the present work, a detailed comparison of this enzyme with FDHs from other sources was carried out. Among eukaryotic formate dehydrogenases, OpaFDH has the highest thermal stability. To elucidate effect of N-terminal residue on the properties of the enzyme, OpaFDH_K (identical to natural) and OpaFDH_AK variants containing an additional Ala residue at the N-terminus were also obtained. It was shown that addition of an Ala residue to the N-terminus reduces four-fold the rate constant of thermal inactivation compared with the addition of a Gly residue. Addition of six more histidine residues to the N-terminus of OpaFDH_AK leads to acceleration of purification, practically does not affect kinetic parameters, but somewhat reduces thermal stability, which, however, can be restored to the level of OpaFDH_AK stability by adding 0.5 M NaCl.
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Pometun A. A. et al. NAD+-Dependent Formate Dehydrogenase from Themotolerant Yeast Ogataea parapolymorpha: Properties and Protein Engineering of the N-Terminal Sequence // Biochemistry (Moscow). 2023. Vol. 88. No. 9. pp. 1378-1389.
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Pometun A. A., Shaposhnikov L. A., Zubanova S. A., Kovalevskii R. P., Atroshenko D. L., POMETUN E. V., Savin S. S., TISHKOV V. I. NAD+-Dependent Formate Dehydrogenase from Themotolerant Yeast Ogataea parapolymorpha: Properties and Protein Engineering of the N-Terminal Sequence // Biochemistry (Moscow). 2023. Vol. 88. No. 9. pp. 1378-1389.
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TY - JOUR
DO - 10.1134/s0006297923090171
UR - https://doi.org/10.1134/s0006297923090171
TI - NAD+-Dependent Formate Dehydrogenase from Themotolerant Yeast Ogataea parapolymorpha: Properties and Protein Engineering of the N-Terminal Sequence
T2 - Biochemistry (Moscow)
AU - Pometun, Anastasia A
AU - Shaposhnikov, Leonid A
AU - Zubanova, Sofiya A.
AU - Kovalevskii, Rostislav P.
AU - Atroshenko, Denis L
AU - POMETUN, EVGENII V.
AU - Savin, Svyatoslav S
AU - TISHKOV, Vladimir I.
PY - 2023
DA - 2023/09/22
PB - Pleiades Publishing
SP - 1378-1389
IS - 9
VL - 88
PMID - 37770404
SN - 0006-2979
SN - 1608-3040
ER -
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BibTex (up to 50 authors)
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@article{2023_Pometun,
author = {Anastasia A Pometun and Leonid A Shaposhnikov and Sofiya A. Zubanova and Rostislav P. Kovalevskii and Denis L Atroshenko and EVGENII V. POMETUN and Svyatoslav S Savin and Vladimir I. TISHKOV},
title = {NAD+-Dependent Formate Dehydrogenase from Themotolerant Yeast Ogataea parapolymorpha: Properties and Protein Engineering of the N-Terminal Sequence},
journal = {Biochemistry (Moscow)},
year = {2023},
volume = {88},
publisher = {Pleiades Publishing},
month = {sep},
url = {https://doi.org/10.1134/s0006297923090171},
number = {9},
pages = {1378--1389},
doi = {10.1134/s0006297923090171}
}
Cite this
MLA
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Pometun, Anastasia A., et al. “NAD+-Dependent Formate Dehydrogenase from Themotolerant Yeast Ogataea parapolymorpha: Properties and Protein Engineering of the N-Terminal Sequence.” Biochemistry (Moscow), vol. 88, no. 9, Sep. 2023, pp. 1378-1389. https://doi.org/10.1134/s0006297923090171.
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