Open Access
Horticulturae, volume 8, issue 1, pages 16
SNPs Associated with Foliar Phylloxera Tolerance in Hybrid Grape Populations Carrying Introgression from Muscadinia
Vasylyk Irina
1
,
Gorislavets Svetlana
1
,
Matveikina Elena
1
,
Lushchay Ekaterina
1
,
Lytkin Kirill
2
,
Grigoreva Elizaveta
1, 2
,
Karzhaev Dmitry
2
,
Volkov Vladimir
1, 2
,
Volodin Vitalii
1
,
Spotar Gennady
1
,
Risovannaya Valentina
1
,
Likhovskoi Vladimir
1
,
Volynkin Vladimir
1
,
Potokina Elena
1, 2
Publication type: Journal Article
Publication date: 2021-12-23
Plant Science
Horticulture
Abstract
Leaf-feeding phylloxera decreases the photosynthetic activity of a grape plant, leading to decreasing number of fruit buds. In addition, phylloxera larvae emerging from the leaf galls may colonize the roots, negatively affecting the growth of the grape plant. In this study, we evaluated host tolerance of three grapevine hybrid populations obtained from crossing of the same maternal grapevine M. no. 31-77-10 with interspecific hybrids carrying introgressions from Muscadinia and other North American Vitis species against leaf-feeding grape phylloxera. Combining genotyping data of the populations obtained with 12,734 SNPs and their resistance phenotypes evaluated in the laboratory experiment, we performed an association study. As the result of GWAS, nine SNPs with the lowest significant p-values were discovered in the whole sample of 139 hybrids as associated with variation of the scores ‘the percentage of infested leaves’ and ‘intensity of gall formation’. Three of the SNPs on LG 7 were located in the same chromosome interval where a major QTL (RDV6) for root phylloxera resistance was reported from Muscadine background. Two SNPs on LG 8 were detected within the gene, encoding E3 ubiquitin-protein ligase UPL4 involved in apoptosis. SNPs detected on LG 13 and LG 18 may overlap with the previously reported QTLs for phylloxera resistance inherited from V. cinerea.
Citations by journals
|
1
|
|
|
Agronomy
|
Agronomy
1 publication, 25%
|
|
Horticulture and viticulture
|
Horticulture and viticulture
1 publication, 25%
|
|
Nanobiotechnology Reports
|
Nanobiotechnology Reports
1 publication, 25%
|
|
1
|
Citations by publishers
|
1
|
|
|
Multidisciplinary Digital Publishing Institute (MDPI)
|
Multidisciplinary Digital Publishing Institute (MDPI)
1 publication, 25%
|
|
All-Russian Horticultural Institute for Breeding Agrotechnology and Nursery
|
All-Russian Horticultural Institute for Breeding Agrotechnology and Nursery
1 publication, 25%
|
|
Pleiades Publishing
|
Pleiades Publishing
1 publication, 25%
|
|
1
|
- We do not take into account publications that without a DOI.
- Statistics recalculated only for publications connected to researchers, organizations and labs registered on the platform.
- Statistics recalculated weekly.
{"yearsCitations":{"type":"bar","data":{"show":true,"labels":[2022,2023],"ids":[0,0],"codes":[0,0],"imageUrls":["",""],"datasets":[{"label":"Citations number","data":[2,2],"backgroundColor":["#3B82F6","#3B82F6"],"percentage":["50","50"],"barThickness":null}]},"options":{"indexAxis":"x","maintainAspectRatio":true,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":1,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Citations per year","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}},"journals":{"type":"bar","data":{"show":true,"labels":["Agronomy","Horticulture and viticulture","Nanobiotechnology Reports"],"ids":[8267,36412,26717],"codes":[0,0,0],"imageUrls":["\/storage\/images\/resized\/MjH1ITP7lMYGxeqUZfkt2BnVLgjkk413jwBV97XX_medium.webp","\/storage\/images\/resized\/9j9pShKK7QnzhjerRVz5FxPyFJm6AlTaDp4S9XP8_medium.webp","\/storage\/images\/resized\/oZgeErrVFhuDksyqFURLvYS1wtVSBWczh001igGo_medium.webp"],"datasets":[{"label":"","data":[1,1,1],"backgroundColor":["#3B82F6","#3B82F6","#3B82F6"],"percentage":[25,25,25],"barThickness":13}]},"options":{"indexAxis":"y","maintainAspectRatio":false,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":null,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Journals","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}},"publishers":{"type":"bar","data":{"show":true,"labels":["Multidisciplinary Digital Publishing Institute (MDPI)","All-Russian Horticultural Institute for Breeding Agrotechnology and Nursery","Pleiades Publishing"],"ids":[202,7587,101],"codes":[0,0,0],"imageUrls":["\/storage\/images\/resized\/MjH1ITP7lMYGxeqUZfkt2BnVLgjkk413jwBV97XX_medium.webp","\/storage\/images\/resized\/9j9pShKK7QnzhjerRVz5FxPyFJm6AlTaDp4S9XP8_medium.webp","\/storage\/images\/resized\/oZgeErrVFhuDksyqFURLvYS1wtVSBWczh001igGo_medium.webp"],"datasets":[{"label":"","data":[1,1,1],"backgroundColor":["#3B82F6","#3B82F6","#3B82F6"],"percentage":[25,25,25],"barThickness":13}]},"options":{"indexAxis":"y","maintainAspectRatio":false,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":null,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Publishers","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}}}
Metrics
Cite this
GOST |
RIS |
BibTex |
MLA
Cite this
GOST
Copy
Vasylyk I. et al. SNPs Associated with Foliar Phylloxera Tolerance in Hybrid Grape Populations Carrying Introgression from Muscadinia // Horticulturae. 2021. Vol. 8. No. 1. p. 16.
GOST all authors (up to 50)
Copy
Vasylyk I., Gorislavets S., Matveikina E., Lushchay E., Lytkin K., Grigoreva E., Karzhaev D., Volkov V., Volodin V., Spotar G., Risovannaya V., Likhovskoi V., Volynkin V., Potokina E. SNPs Associated with Foliar Phylloxera Tolerance in Hybrid Grape Populations Carrying Introgression from Muscadinia // Horticulturae. 2021. Vol. 8. No. 1. p. 16.
Cite this
RIS
Copy
TY - JOUR
DO - 10.3390/horticulturae8010016
UR - https://doi.org/10.3390%2Fhorticulturae8010016
TI - SNPs Associated with Foliar Phylloxera Tolerance in Hybrid Grape Populations Carrying Introgression from Muscadinia
T2 - Horticulturae
AU - Vasylyk, Irina
AU - Gorislavets, Svetlana
AU - Lushchay, Ekaterina
AU - Lytkin, Kirill
AU - Karzhaev, Dmitry
AU - Volodin, Vitalii
AU - Risovannaya, Valentina
AU - Likhovskoi, Vladimir
AU - Potokina, Elena
AU - Matveikina, Elena
AU - Grigoreva, Elizaveta
AU - Volkov, Vladimir
AU - Spotar, Gennady
AU - Volynkin, Vladimir
PY - 2021
DA - 2021/12/23 00:00:00
PB - Multidisciplinary Digital Publishing Institute (MDPI)
SP - 16
IS - 1
VL - 8
SN - 2311-7524
ER -
Cite this
BibTex
Copy
@article{2021_Vasylyk,
author = {Irina Vasylyk and Svetlana Gorislavets and Ekaterina Lushchay and Kirill Lytkin and Dmitry Karzhaev and Vitalii Volodin and Valentina Risovannaya and Vladimir Likhovskoi and Elena Potokina and Elena Matveikina and Elizaveta Grigoreva and Vladimir Volkov and Gennady Spotar and Vladimir Volynkin},
title = {SNPs Associated with Foliar Phylloxera Tolerance in Hybrid Grape Populations Carrying Introgression from Muscadinia},
journal = {Horticulturae},
year = {2021},
volume = {8},
publisher = {Multidisciplinary Digital Publishing Institute (MDPI)},
month = {dec},
url = {https://doi.org/10.3390%2Fhorticulturae8010016},
number = {1},
pages = {16},
doi = {10.3390/horticulturae8010016}
}
Cite this
MLA
Copy
Vasylyk, Irina, et al. “SNPs Associated with Foliar Phylloxera Tolerance in Hybrid Grape Populations Carrying Introgression from Muscadinia.” Horticulturae, vol. 8, no. 1, Dec. 2021, p. 16. https://doi.org/10.3390%2Fhorticulturae8010016.
Profiles