Open Access
Open access
MDPI
Hydrobiology
,  volume 3 ,  issue 4 ,  pages 337-349

Genetic and Haplotype Diversity of Clarias gariepinus (Burchell 1822) Based on Cytochrome c Oxidase I (COI) Gene

Publication type: Journal Article
Publication date: 2024-10-29
MDPI
scimago Q2
SJR: 0.453
CiteScore: 3.7
Impact factor: —
ISSN: 26739917
Abstract

The evaluation of mitochondrial DNA and genetic analysis is helpful for economically significant species. Clarias gariepinus is a critical species in aquaculture. This study investigates the genetic diversity and population differentiation of C. gariepinus from 19 countries using 164 sequences of the mitochondrial DNA’s Cytochrome c oxidase I (COI) gene. The haplotype analysis revealed a total of 17 haplotypes, with a nucleotide diversity (π) of 0.012 and a haplotype diversity (Hd) of 0.87. The results of an AMOVA and fixation index indicated significant genetic variation and structure among the populations. Additionally, neutrality tests and mismatch distribution analysis supported the hypothesis of under-purifying selection in C. gariepinus. The findings suggested that the population did not experience expansion. In conclusion, the genetic analysis highlighted substantial variation among C. gariepinus populations from different locations, providing valuable insights for the global management of this species.

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Aminisarte M., Moyo N. A. G. Genetic and Haplotype Diversity of Clarias gariepinus (Burchell 1822) Based on Cytochrome c Oxidase I (COI) Gene // Hydrobiology. 2024. Vol. 3. No. 4. pp. 337-349.
GOST all authors (up to 50) Copy
Aminisarte M., Moyo N. A. G. Genetic and Haplotype Diversity of Clarias gariepinus (Burchell 1822) Based on Cytochrome c Oxidase I (COI) Gene // Hydrobiology. 2024. Vol. 3. No. 4. pp. 337-349.
RIS |
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RIS Copy
TY - JOUR
DO - 10.3390/hydrobiology3040021
UR - https://www.mdpi.com/2673-9917/3/4/21
TI - Genetic and Haplotype Diversity of Clarias gariepinus (Burchell 1822) Based on Cytochrome c Oxidase I (COI) Gene
T2 - Hydrobiology
AU - Aminisarte, Mehrnoush
AU - Moyo, Ngonidzashe A G
PY - 2024
DA - 2024/10/29
PB - MDPI
SP - 337-349
IS - 4
VL - 3
SN - 2673-9917
ER -
BibTex |
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BibTex (up to 50 authors) Copy
@article{2024_Aminisarte,
author = {Mehrnoush Aminisarte and Ngonidzashe A G Moyo},
title = {Genetic and Haplotype Diversity of Clarias gariepinus (Burchell 1822) Based on Cytochrome c Oxidase I (COI) Gene},
journal = {Hydrobiology},
year = {2024},
volume = {3},
publisher = {MDPI},
month = {oct},
url = {https://www.mdpi.com/2673-9917/3/4/21},
number = {4},
pages = {337--349},
doi = {10.3390/hydrobiology3040021}
}
MLA
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Aminisarte, Mehrnoush, and Ngonidzashe A G Moyo. “Genetic and Haplotype Diversity of Clarias gariepinus (Burchell 1822) Based on Cytochrome c Oxidase I (COI) Gene.” Hydrobiology, vol. 3, no. 4, Oct. 2024, pp. 337-349. https://www.mdpi.com/2673-9917/3/4/21.