Open Access
Open access
volume 21 issue 14 pages 5004

Genetically Encoded Fluorescent Sensor for Poly-ADP-Ribose

Nadezda M Podvalnaya 1, 2
Varvara V. Dudenkova 3
Anna S. Efremova 2
DMITRY A. GORBACHEV 1
Elena V. Zagaynova 3, 6
Stanislav I. Shram 2
Publication typeJournal Article
Publication date2020-07-15
scimago Q1
wos Q1
SJR1.273
CiteScore9.0
Impact factor4.9
ISSN16616596, 14220067
PubMed ID:  32679873
Catalysis
Organic Chemistry
Inorganic Chemistry
Physical and Theoretical Chemistry
Computer Science Applications
Spectroscopy
Molecular Biology
General Medicine
Abstract

Poly-(ADP-ribosyl)-ation (PARylation) is a reversible post-translational modification of proteins and DNA that plays an important role in various cellular processes such as DNA damage response, replication, transcription, and cell death. Here we designed a fully genetically encoded fluorescent sensor for poly-(ADP-ribose) (PAR) based on Förster resonance energy transfer (FRET). The WWE domain, which recognizes iso-ADP-ribose internal PAR-specific structural unit, was used as a PAR-targeting module. The sensor consisted of cyan Turquoise2 and yellow Venus fluorescent proteins, each in fusion with the WWE domain of RNF146 E3 ubiquitin ligase protein. This bipartite sensor named sPARroW (sensor for PAR relying on WWE) enabled monitoring of PAR accumulation and depletion in live mammalian cells in response to different stimuli, namely hydrogen peroxide treatment, UV irradiation and hyperthermia.

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GOST |
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GOST Copy
Serebrovskaya E. O. et al. Genetically Encoded Fluorescent Sensor for Poly-ADP-Ribose // International Journal of Molecular Sciences. 2020. Vol. 21. No. 14. p. 5004.
GOST all authors (up to 50) Copy
Serebrovskaya E. O., Podvalnaya N. M., Dudenkova V. V., Efremova A. S., Gurskaya N. G., GORBACHEV D. A., Luzhin A. V., Kantidze O. L., Zagaynova E. V., Shram S. I., Lukyanov K. A. Genetically Encoded Fluorescent Sensor for Poly-ADP-Ribose // International Journal of Molecular Sciences. 2020. Vol. 21. No. 14. p. 5004.
RIS |
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RIS Copy
TY - JOUR
DO - 10.3390/ijms21145004
UR - https://doi.org/10.3390/ijms21145004
TI - Genetically Encoded Fluorescent Sensor for Poly-ADP-Ribose
T2 - International Journal of Molecular Sciences
AU - Serebrovskaya, Ekaterina O.
AU - Podvalnaya, Nadezda M
AU - Dudenkova, Varvara V.
AU - Efremova, Anna S.
AU - Gurskaya, Nadya G.
AU - GORBACHEV, DMITRY A.
AU - Luzhin, Artem V.
AU - Kantidze, Omar L.
AU - Zagaynova, Elena V.
AU - Shram, Stanislav I.
AU - Lukyanov, Konstantin A.
PY - 2020
DA - 2020/07/15
PB - MDPI
SP - 5004
IS - 14
VL - 21
PMID - 32679873
SN - 1661-6596
SN - 1422-0067
ER -
BibTex |
Cite this
BibTex (up to 50 authors) Copy
@article{2020_Serebrovskaya,
author = {Ekaterina O. Serebrovskaya and Nadezda M Podvalnaya and Varvara V. Dudenkova and Anna S. Efremova and Nadya G. Gurskaya and DMITRY A. GORBACHEV and Artem V. Luzhin and Omar L. Kantidze and Elena V. Zagaynova and Stanislav I. Shram and Konstantin A. Lukyanov},
title = {Genetically Encoded Fluorescent Sensor for Poly-ADP-Ribose},
journal = {International Journal of Molecular Sciences},
year = {2020},
volume = {21},
publisher = {MDPI},
month = {jul},
url = {https://doi.org/10.3390/ijms21145004},
number = {14},
pages = {5004},
doi = {10.3390/ijms21145004}
}
MLA
Cite this
MLA Copy
Serebrovskaya, Ekaterina O., et al. “Genetically Encoded Fluorescent Sensor for Poly-ADP-Ribose.” International Journal of Molecular Sciences, vol. 21, no. 14, Jul. 2020, p. 5004. https://doi.org/10.3390/ijms21145004.