Open Access
Open access
volume 27 issue 2 pages 430

Bispidine Platform as a Tool for Studying Amide Configuration Stability

Publication typeJournal Article
Publication date2022-01-10
scimago Q1
wos Q2
SJR0.865
CiteScore8.6
Impact factor4.6
ISSN14203049
Organic Chemistry
Drug Discovery
Physical and Theoretical Chemistry
Pharmaceutical Science
Molecular Medicine
Analytical Chemistry
Chemistry (miscellaneous)
Abstract

In this work, the solution conformations of seventeen 3,7-diacyl bispidines were studied by means of NMR spectroscopy including VT NMR experiments. The acyl groups included alkyl, alkenyl, aryl, hetaryl, and ferrocene moieties. The presence of syn/anti-isomers and their ratios were estimated, and some reasons explaining experimental facts were formulated. In particular, all aliphatic and heterocyclic units in the acylic R(CO) fragments led to an increased content of the syn-form in DMSO-d6 solutions. In contrast, only the anti-form was detected in DMSO-d6 and CDCl3 in the case when R = Ph, ferrocenyl, (R)-myrtenyl. In the case of a chiral compound derived from the natural terpene myrtene, a new dynamic process was found in addition to the expected inversion around the amide N-C(O) bond. Here, rotation around the CO-C=C bond in the acylic R fragment was detected, and its energy was estimated. For this compound, ΔG for amide N-C(O) inversion was found to be equal to 15.0 ± 0.2 kcal/mol, and for the rotation around the N(CO)–C2′ bond, it was equal to 15.6 ± 0.3 kcal/mol. NMR analysis of the chiral bispidine-based bis-amide was conducted for the first time. Two X-ray structures are reported. For the first time, the unique syn-form was found in the crystal of an acyclic bispidine-based bis-amide. Quantum chemical calculations revealed the unexpected mechanism for amide bond inversion. It was found that the reaction does not proceed as direct N-C(O) bond inversion in the double-chair (CC) conformation but rather requires the conformational transformation into the chair–boat (CB) form first. The amide bond inversion in the latter requires less energy than in the CC form.

Found 
Found 

Top-30

Journals

1
2
Russian Chemical Bulletin
2 publications, 15.38%
Molecules
1 publication, 7.69%
Russian Journal of Organic Chemistry
1 publication, 7.69%
Organics
1 publication, 7.69%
Journal of Organic Chemistry
1 publication, 7.69%
Organic and Biomolecular Chemistry
1 publication, 7.69%
Inorganic Chemistry
1 publication, 7.69%
Physical Chemistry Chemical Physics
1 publication, 7.69%
Natural Product Communications
1 publication, 7.69%
Журнал органической химии
1 publication, 7.69%
Chemistry of Heterocyclic Compounds
1 publication, 7.69%
Organic Letters
1 publication, 7.69%
1
2

Publishers

1
2
3
American Chemical Society (ACS)
3 publications, 23.08%
Springer Nature
3 publications, 23.08%
MDPI
2 publications, 15.38%
Royal Society of Chemistry (RSC)
2 publications, 15.38%
Pleiades Publishing
1 publication, 7.69%
SAGE
1 publication, 7.69%
Akademizdatcenter Nauka
1 publication, 7.69%
1
2
3
  • We do not take into account publications without a DOI.
  • Statistics recalculated weekly.

Are you a researcher?

Create a profile to get free access to personal recommendations for colleagues and new articles.
Metrics
13
Share
Cite this
GOST |
Cite this
GOST Copy
Krut'ko D. P. et al. Bispidine Platform as a Tool for Studying Amide Configuration Stability // Molecules. 2022. Vol. 27. No. 2. p. 430.
GOST all authors (up to 50) Copy
Krut'ko D. P., Medvedko A. V., Lyssenko K. A., Churakov A. V., Dalinger A. I., Kalinin M. A., Gudovannyy A. O., Ponomarev K. Y., Suslov E., Vatsadze S. Z. Bispidine Platform as a Tool for Studying Amide Configuration Stability // Molecules. 2022. Vol. 27. No. 2. p. 430.
RIS |
Cite this
RIS Copy
TY - JOUR
DO - 10.3390/molecules27020430
UR - https://www.mdpi.com/1420-3049/27/2/430
TI - Bispidine Platform as a Tool for Studying Amide Configuration Stability
T2 - Molecules
AU - Krut'ko, Dmitry P.
AU - Medvedko, Alexey V
AU - Lyssenko, Konstantin A.
AU - Churakov, Andrei V.
AU - Dalinger, Alexander I
AU - Kalinin, Mikhail A
AU - Gudovannyy, Alexey O
AU - Ponomarev, Konstantin Y
AU - Suslov, E.V.
AU - Vatsadze, Sergey Z.
PY - 2022
DA - 2022/01/10
PB - MDPI
SP - 430
IS - 2
VL - 27
PMID - 35056748
SN - 1420-3049
ER -
BibTex |
Cite this
BibTex (up to 50 authors) Copy
@article{2022_Krut'ko,
author = {Dmitry P. Krut'ko and Alexey V Medvedko and Konstantin A. Lyssenko and Andrei V. Churakov and Alexander I Dalinger and Mikhail A Kalinin and Alexey O Gudovannyy and Konstantin Y Ponomarev and E.V. Suslov and Sergey Z. Vatsadze},
title = {Bispidine Platform as a Tool for Studying Amide Configuration Stability},
journal = {Molecules},
year = {2022},
volume = {27},
publisher = {MDPI},
month = {jan},
url = {https://www.mdpi.com/1420-3049/27/2/430},
number = {2},
pages = {430},
doi = {10.3390/molecules27020430}
}
MLA
Cite this
MLA Copy
Krut'ko, Dmitry P., et al. “Bispidine Platform as a Tool for Studying Amide Configuration Stability.” Molecules, vol. 27, no. 2, Jan. 2022, p. 430. https://www.mdpi.com/1420-3049/27/2/430.