Open Access
Lecture Notes in Computer Science, volume 9137 LNCS, pages 113-121
On quantum chemistry code adaptation for RSC petastream architecture
2
ZAO “RSC Technologies”, Moscow, Russia
|
Publication type: Book Chapter
Publication date: 2015-06-19
Journal:
Lecture Notes in Computer Science
Quartile SCImago
Q3
Quartile WOS
—
Impact factor: —
ISSN: 03029743, 16113349, 18612075, 18612083
Abstract
Molecular simulations with quantum chemistry methods consume a large portion of CPU cycles in modern high-performance computing centers. Evolution of modern processors and HPC architectures necessitates adaptation of software to new hardware generations. The present work concentrates on the optimization of the widely used GAMESS code to Intel Xeon Phi architecture and recently devised RSC PetaStream platform. Since improvement in parallelization is required, the most frequently used Hartree-Fock and DFT methods are explored for additional parallelization options. The Xeon Phi requires vectorization that is important for electron-repulsion integrals (ERI) calculations to achieve good performance.
Citations by journals
1
|
|
International Journal of High Performance Computing Applications
|
International Journal of High Performance Computing Applications
1 publication, 25%
|
International Journal of Quantum Chemistry
|
International Journal of Quantum Chemistry
1 publication, 25%
|
1
|
Citations by publishers
1
|
|
SAGE
|
SAGE
1 publication, 25%
|
Wiley
|
Wiley
1 publication, 25%
|
1
|
- We do not take into account publications that without a DOI.
- Statistics recalculated only for publications connected to researchers, organizations and labs registered on the platform.
- Statistics recalculated weekly.
{"yearsCitations":{"type":"bar","data":{"show":true,"labels":[2017,2018,2019,2020,2021],"ids":[0,0,0,0,0],"codes":[0,0,0,0,0],"imageUrls":["","","","",""],"datasets":[{"label":"Citations number","data":[2,0,1,0,1],"backgroundColor":["#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6"],"percentage":["50",0,"25",0,"25"],"barThickness":null}]},"options":{"indexAxis":"x","maintainAspectRatio":true,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":1,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Citations per year","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}},"journals":{"type":"bar","data":{"show":true,"labels":["International Journal of High Performance Computing Applications","International Journal of Quantum Chemistry"],"ids":[22654,15897],"codes":[0,0],"imageUrls":["\/storage\/images\/resized\/ruydfaB80LDjlkYqsfOeUAZohOIODyq7bQzis5O7_medium.webp","\/storage\/images\/resized\/bRyGpdm98BkAUYiK1YFNpl5Z7hPu6Gd87gbIeuG3_medium.webp"],"datasets":[{"label":"","data":[1,1],"backgroundColor":["#3B82F6","#3B82F6"],"percentage":[25,25],"barThickness":13}]},"options":{"indexAxis":"y","maintainAspectRatio":false,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":null,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Journals","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}},"publishers":{"type":"bar","data":{"show":true,"labels":["SAGE","Wiley"],"ids":[31,11],"codes":[0,0],"imageUrls":["\/storage\/images\/resized\/ruydfaB80LDjlkYqsfOeUAZohOIODyq7bQzis5O7_medium.webp","\/storage\/images\/resized\/bRyGpdm98BkAUYiK1YFNpl5Z7hPu6Gd87gbIeuG3_medium.webp"],"datasets":[{"label":"","data":[1,1],"backgroundColor":["#3B82F6","#3B82F6"],"percentage":[25,25],"barThickness":13}]},"options":{"indexAxis":"y","maintainAspectRatio":false,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":null,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Publishers","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}}}
Metrics
Cite this
GOST |
RIS |
BibTex
Cite this
GOST
Copy
Mironov V., Khrenova M., Moskovsky A. On quantum chemistry code adaptation for RSC petastream architecture // Lecture Notes in Computer Science. 2015. Vol. 9137 LNCS. pp. 113-121.
GOST all authors (up to 50)
Copy
Mironov V., Khrenova M., Moskovsky A. On quantum chemistry code adaptation for RSC petastream architecture // Lecture Notes in Computer Science. 2015. Vol. 9137 LNCS. pp. 113-121.
Cite this
RIS
Copy
TY - GENERIC
DO - 10.1007/978-3-319-20119-1_9
UR - https://doi.org/10.1007%2F978-3-319-20119-1_9
TI - On quantum chemistry code adaptation for RSC petastream architecture
T2 - Lecture Notes in Computer Science
AU - Mironov, Vladimir
AU - Khrenova, Maria
AU - Moskovsky, Alexander
PY - 2015
DA - 2015/06/19 00:00:00
PB - Springer Nature
SP - 113-121
VL - 9137 LNCS
SN - 0302-9743
SN - 1611-3349
SN - 1861-2075
SN - 1861-2083
ER -
Cite this
BibTex
Copy
@incollection{2015_Mironov,
author = {Vladimir Mironov and Maria Khrenova and Alexander Moskovsky},
title = {On quantum chemistry code adaptation for RSC petastream architecture},
publisher = {Springer Nature},
year = {2015},
volume = {9137 LNCS},
pages = {113--121},
month = {jun}
}