Open Access

Infection, Genetics and Evolution, volume 12, issue 4, pages 732-736

'Lethal' combination of Mycobacterium tuberculosis Beijing genotype and human CD209-336G allele in Russian male population

Ogarkov Oleg

Ogarkov Oleg ¹

Mokrousov Igor

Mokrousov I. V. ²

Sinkov Viacheslav

Sinkov Viacheslav ³

Zhdanova Svetlana

Zhdanova Svetlana ¹

Antipina Svetlana ⁴

Savilov Eugeniy ¹

Savilov Eugeniy

Hide authors affiliations Show authors affiliations: 4 affiliations

Laboratory of Epidemiology of Anthroponosis Infections, Research Institute of Epidemiology and Microbiology, Scientific Сentre of the Family Health and Human Reproduction Problems, SB RAMS, Irkutsk 664003, Russia |

Laboratory of Molecular Microbiology, St. Petersburg Pasteur Institute, St. Petersburg 197101 Russia. |

Department of Pathology, Irkutsk Regional Diagnostic Center, Irkutsk 664047, Russia |

⁴

Chair of Pathology, Irkutsk State Medical University, Irkutsk 664003, Russia |

Publication type: Journal Article

Publication date: 2012-06-01

Elsevier

Journal: Infection, Genetics and Evolution

Quartile SCImago

Quartile WOS

Impact factor: 3.2

ISSN: 15671348, 15677257

DOI: 10.1016/J.MEEGID.2011.10.005

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PubMed ID: 22027159

Molecular Biology

Genetics

Microbiology (medical)

Microbiology

Infectious Diseases

Ecology, Evolution, Behavior and Systematics

Abstract

► Combination of Mycobacterium tuberculosis lineages and human CD209 alleles correlated with outcome of pulmonary tuberculosis . ► Beijing genotype was more frequently found in autopsy versus patient with pulmonary TB. ► Combination of CD209 −336G and Beijing genotype was found most dangerous in male group. An interaction of different human alleles and endemic bacterial strains may be clinically manifested as different outcome of the disease in different hosts infected with the same genotype. The primary objective of this study was to investigate this issue in the model of Mycobacterium tuberculosis and human DC-SIGN encoding CD209 promoter SNP (rs4804803) in Russian Siberian population. We sought to find a possible combination of M. tuberculosis lineage and human host allele/genotype correlating with unfavorable outcome of the disease. The 101 paired DNA samples from patients with pulmonary TB (human and M. tuberculosis DNA) were studied by 12-loci MIRU-VNTR typing ( M. tuberculosis strains) and CD209 −336 A/G typing (human DNA). Ninety autopsy DNA samples as a source of human and mycobacterial nucleic acids from persons who died from TB were also subjected to the same genotyping procedures. A human control group consisted of 177 healthy individuals. The Beijing genotype was more frequently identified in autopsy versus patient samples, in 70.0% and 51.5%, respectively ( χ 2 = 6.06, P = 0.01). Regarding other M. tuberculosis genetic families, no significant difference in LAM family distribution among patient strains and autopsy samples has been found. In contrast, Ural genotype was significantly less frequently detected in the autopsy samples ( χ 2 = 6.12, P = 0.01). Allelic and genotypic frequencies of the CD209 −336A/G did not differ significantly under global comparison when contrasting controls versus patients versus autopsy samples. However intriguing and contrasting significant associations were found in the male subgroup under M. tuberculosis genotype-stratified comparisons. Firstly, male carriers of −336AA genotype were more frequently infected with Beijing genotype ( χ 2 = 5.2, P = 0.02). Secondly and remarkably, this association was inverted in the autopsy sample: male carriers of −336AA genotype died less frequently due to TB caused by a Beijing rather than a non-Beijing strain ( χ 2 = 5.37, P = 0.02). In conclusion, we hypothesize that although carriers of CD209 −336A allele are more sensitive to infection with a Beijing strain, a combination of human CD209 −336G allele and M. tuberculosis Beijing genotype leads more frequently to the lethal outcome in pulmonary TB male patients in Russian (Caucasian) population.

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Ogarkov O. et al. 'Lethal' combination of Mycobacterium tuberculosis Beijing genotype and human CD209-336G allele in Russian male population // Infection, Genetics and Evolution. 2012. Vol. 12. No. 4. pp. 732-736.

GOST all authors (up to 50) Copy

Ogarkov O., Ogarkov O., Mokrousov I., Mokrousov I. V., Sinkov V., Sinkov V., Zhdanova S., Zhdanova S., Antipina S., Savilov E., Savilov E. 'Lethal' combination of Mycobacterium tuberculosis Beijing genotype and human CD209-336G allele in Russian male population // Infection, Genetics and Evolution. 2012. Vol. 12. No. 4. pp. 732-736.

RIS |

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RIS Copy

TY - JOUR

DO - 10.1016/J.MEEGID.2011.10.005

UR - https://doi.org/10.1016%2FJ.MEEGID.2011.10.005

TI - 'Lethal' combination of Mycobacterium tuberculosis Beijing genotype and human CD209-336G allele in Russian male population

T2 - Infection, Genetics and Evolution

AU - Ogarkov, Oleg

AU - Mokrousov, Igor

AU - Sinkov, Viacheslav

AU - Zhdanova, Svetlana

AU - Antipina, Svetlana

AU - Savilov, Eugeniy

AU - Ogarkov, Oleg

AU - Mokrousov, I. V.

AU - Sinkov, Viacheslav

AU - Zhdanova, Svetlana

AU - Savilov, Eugeniy

PY - 2012

DA - 2012/06/01 00:00:00

PB - Elsevier

SP - 732-736

IS - 4

VL - 12

PMID - 22027159

SN - 1567-1348

SN - 1567-7257

ER -

BibTex |

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BibTex Copy

@article{2012_Ogarkov,

author = {Oleg Ogarkov and Igor Mokrousov and Viacheslav Sinkov and Svetlana Zhdanova and Svetlana Antipina and Eugeniy Savilov and Oleg Ogarkov and I. V. Mokrousov and Viacheslav Sinkov and Svetlana Zhdanova and Eugeniy Savilov},

title = {'Lethal' combination of Mycobacterium tuberculosis Beijing genotype and human CD209-336G allele in Russian male population},

journal = {Infection, Genetics and Evolution},

year = {2012},

volume = {12},

publisher = {Elsevier},

month = {jun},

url = {https://doi.org/10.1016%2FJ.MEEGID.2011.10.005},

number = {4},

pages = {732--736},

doi = {10.1016/J.MEEGID.2011.10.005}

}

MLA

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MLA Copy

Ogarkov, Oleg, et al. “'Lethal' combination of Mycobacterium tuberculosis Beijing genotype and human CD209-336G allele in Russian male population.” Infection, Genetics and Evolution, vol. 12, no. 4, Jun. 2012, pp. 732-736. https://doi.org/10.1016%2FJ.MEEGID.2011.10.005.

Found error?

Publisher

Elsevier

Journal

Infection, Genetics and Evolution

Quartile SCImago

Quartile WOS

Impact factor

3.2

ISSN

15671348 (Print)
15677257 (Electronic)

Labs

Laboratory of Epidemiologically and Socially Significant Infections

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