Current Opinion in Structural Biology, volume 72, pages 135-144

Deep learning approaches for de novo drug design: An overview

Mingyang Wang 1
Zhe Wang 1
Huiyong Sun 2
Jingjing Wang 1
Chao Shen 1
Gaoqi Weng 1
Xin Chai 1
Honglin Li 3, 4
Show full list: 10 authors
Publication typeJournal Article
Publication date2022-02-01
scimago Q1
wos Q1
SJR2.824
CiteScore12.2
Impact factor6.1
ISSN0959440X, 1879033X
Molecular Biology
Structural Biology
Abstract
De novo drug design is the process of generating novel lead compounds with desirable pharmacological and physiochemical properties. The application of deep learning (DL) in de novo drug design has become a hot topic, and many DL-based approaches have been developed for molecular generation tasks. Generally, these approaches were developed as per four frameworks: recurrent neural networks; encoder-decoder; reinforcement learning; and generative adversarial networks. In this review, we first introduced the molecular representation and assessment metrics used in DL-based de novo drug design. Then, we summarized the features of each architecture. Finally, the potential challenges and future directions of DL-based molecular generation were prospected.
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