Pitfalls in Computational Modeling of Chemical Reactions and How To Avoid Them
Ho Ryu
1, 2
,
Jiyong Park
1, 2
,
Hong Ki Kim
1, 2
,
Ji Young Park
1, 2
,
Seoung Tae Kim
1, 2
,
Mu-Hyun Baik
1, 2
Publication type: Journal Article
Publication date: 2018-09-24
scimago Q2
wos Q1
SJR: 0.676
CiteScore: 5.1
Impact factor: 2.9
ISSN: 02767333, 15206041
Organic Chemistry
Inorganic Chemistry
Physical and Theoretical Chemistry
Abstract
Quantum chemical molecular modeling has become a standard tool in organometallic chemistry. In particular, density functional theory calculations are now indispensable for investigating the mechanism of even complex reactions and deliver precise energies of intermediates and transition states. Because software packages have become user-friendly and are widely available, even nonexperts can now produce high-quality computer models. In this tutorial, we highlight nontrivial mistakes, misconceptions, and misinterpretations often encountered when producing models of a chemical reaction that can lead to wrong conclusions. The reasons for these errors are conceptually explained in simple terms, and remedies are offered.
Found
Nothing found, try to update filter.
Found
Nothing found, try to update filter.
Top-30
Journals
|
2
4
6
8
10
12
14
|
|
|
Organometallics
14 publications, 7.69%
|
|
|
Journal of the American Chemical Society
13 publications, 7.14%
|
|
|
ACS Catalysis
8 publications, 4.4%
|
|
|
Chemical Science
7 publications, 3.85%
|
|
|
Journal of Physical Chemistry A
6 publications, 3.3%
|
|
|
Dalton Transactions
6 publications, 3.3%
|
|
|
European Journal of Organic Chemistry
5 publications, 2.75%
|
|
|
Angewandte Chemie - International Edition
5 publications, 2.75%
|
|
|
Angewandte Chemie
5 publications, 2.75%
|
|
|
Chemistry - A European Journal
4 publications, 2.2%
|
|
|
Journal of Computational Chemistry
4 publications, 2.2%
|
|
|
Journal of Organic Chemistry
4 publications, 2.2%
|
|
|
Inorganic Chemistry
4 publications, 2.2%
|
|
|
New Journal of Chemistry
4 publications, 2.2%
|
|
|
Advanced Synthesis and Catalysis
4 publications, 2.2%
|
|
|
Physical Chemistry Chemical Physics
3 publications, 1.65%
|
|
|
Wiley Interdisciplinary Reviews: Computational Molecular Science
2 publications, 1.1%
|
|
|
ChemCatChem
2 publications, 1.1%
|
|
|
Industrial & Engineering Chemistry Research
2 publications, 1.1%
|
|
|
Russian Journal of Physical Chemistry A
2 publications, 1.1%
|
|
|
ChemPhysChem
2 publications, 1.1%
|
|
|
Topics in Organometallic Chemistry
2 publications, 1.1%
|
|
|
Food Chemistry: X
2 publications, 1.1%
|
|
|
Food Chemistry
2 publications, 1.1%
|
|
|
Journal of Chemical Theory and Computation
2 publications, 1.1%
|
|
|
Chemistry - An Asian Journal
1 publication, 0.55%
|
|
|
Journal of Chemical Physics
1 publication, 0.55%
|
|
|
Molecules
1 publication, 0.55%
|
|
|
Chinese Journal of Organic Chemistry
1 publication, 0.55%
|
|
|
2
4
6
8
10
12
14
|
Publishers
|
10
20
30
40
50
60
|
|
|
American Chemical Society (ACS)
58 publications, 31.87%
|
|
|
Wiley
45 publications, 24.73%
|
|
|
Elsevier
24 publications, 13.19%
|
|
|
Royal Society of Chemistry (RSC)
24 publications, 13.19%
|
|
|
Springer Nature
12 publications, 6.59%
|
|
|
MDPI
5 publications, 2.75%
|
|
|
Pleiades Publishing
2 publications, 1.1%
|
|
|
AIP Publishing
1 publication, 0.55%
|
|
|
Shanghai Institute of Organic Chemistry
1 publication, 0.55%
|
|
|
King Saud University
1 publication, 0.55%
|
|
|
Taylor & Francis
1 publication, 0.55%
|
|
|
Georg Thieme Verlag KG
1 publication, 0.55%
|
|
|
American Association for the Advancement of Science (AAAS)
1 publication, 0.55%
|
|
|
IOP Publishing
1 publication, 0.55%
|
|
|
Canadian Science Publishing
1 publication, 0.55%
|
|
|
The Royal Society
1 publication, 0.55%
|
|
|
LLC CPC Business Perspectives
1 publication, 0.55%
|
|
|
American Vacuum Society
1 publication, 0.55%
|
|
|
Copernicus
1 publication, 0.55%
|
|
|
10
20
30
40
50
60
|
- We do not take into account publications without a DOI.
- Statistics recalculated weekly.
Are you a researcher?
Create a profile to get free access to personal recommendations for colleagues and new articles.
Metrics
182
Total citations:
182
Citations from 2024:
62
(34%)
Cite this
GOST |
RIS |
BibTex |
MLA
Cite this
GOST
Copy
Ryu H. et al. Pitfalls in Computational Modeling of Chemical Reactions and How To Avoid Them // Organometallics. 2018. Vol. 37. No. 19. pp. 3228-3239.
GOST all authors (up to 50)
Copy
Ryu H., Park J., Kim H. K., Park J. Y., Kim S. T., Baik M. Pitfalls in Computational Modeling of Chemical Reactions and How To Avoid Them // Organometallics. 2018. Vol. 37. No. 19. pp. 3228-3239.
Cite this
RIS
Copy
TY - JOUR
DO - 10.1021/acs.organomet.8b00456
UR - https://doi.org/10.1021/acs.organomet.8b00456
TI - Pitfalls in Computational Modeling of Chemical Reactions and How To Avoid Them
T2 - Organometallics
AU - Ryu, Ho
AU - Park, Jiyong
AU - Kim, Hong Ki
AU - Park, Ji Young
AU - Kim, Seoung Tae
AU - Baik, Mu-Hyun
PY - 2018
DA - 2018/09/24
PB - American Chemical Society (ACS)
SP - 3228-3239
IS - 19
VL - 37
SN - 0276-7333
SN - 1520-6041
ER -
Cite this
BibTex (up to 50 authors)
Copy
@article{2018_Ryu,
author = {Ho Ryu and Jiyong Park and Hong Ki Kim and Ji Young Park and Seoung Tae Kim and Mu-Hyun Baik},
title = {Pitfalls in Computational Modeling of Chemical Reactions and How To Avoid Them},
journal = {Organometallics},
year = {2018},
volume = {37},
publisher = {American Chemical Society (ACS)},
month = {sep},
url = {https://doi.org/10.1021/acs.organomet.8b00456},
number = {19},
pages = {3228--3239},
doi = {10.1021/acs.organomet.8b00456}
}
Cite this
MLA
Copy
Ryu, Ho, et al. “Pitfalls in Computational Modeling of Chemical Reactions and How To Avoid Them.” Organometallics, vol. 37, no. 19, Sep. 2018, pp. 3228-3239. https://doi.org/10.1021/acs.organomet.8b00456.