volume 14 issue 4 pages 369-372

Estimating the time scale of chemical exchange of proteins from measurements of transverse relaxation rates in solution

Publication typeJournal Article
Publication date1999-01-01
scimago Q2
wos Q2
SJR0.652
CiteScore5.0
Impact factor1.9
ISSN09252738, 15735001
Biochemistry
Spectroscopy
Abstract
Chemical (conformational) exchange on the ms-μs time scale is reliably identified by the observation of transverse relaxation rates, Rex, that depend upon the strength of the effective field (ω1eff=γB1eff) used in spin lock or CPMG experiments. In order to determine if the exchange correlation time, τex, is the fast or slow limit, measurements of (i) signal line shape and (ii) temperature dependence of Rex have been commonly used in studies of stable, small molecules. However, these approaches are often not applicable to proteins, because sample stability and solubility, respectively, limit the temperature range and signal sensitivity of experiments. Herein we use a complex, but general, two-site exchange equation to show when the simple fast exchange equations for Rex are good approximations, in the case of proteins. We then present a simple empirical equation that approximately predicts Rex in all exchange regimes, and explains these results in a clear, straightforward manner. Finally we show how one can reliably determine whether τex is in the fast or slow exchange limit.
Found 

Top-30

Journals

1
2
3
4
5
6
7
8
9
Journal of the American Chemical Society
9 publications, 9.28%
Journal of Biomolecular NMR
9 publications, 9.28%
Progress in Nuclear Magnetic Resonance Spectroscopy
7 publications, 7.22%
Biochemistry
6 publications, 6.19%
Journal of Magnetic Resonance
6 publications, 6.19%
Journal of Molecular Biology
6 publications, 6.19%
Molecules
2 publications, 2.06%
Biochimica et Biophysica Acta - Proteins and Proteomics
2 publications, 2.06%
Biophysical Journal
2 publications, 2.06%
Methods
2 publications, 2.06%
Chemical Reviews
2 publications, 2.06%
Annual Reports on NMR Spectroscopy
2 publications, 2.06%
Quarterly Reviews of Biophysics
2 publications, 2.06%
Methods in Enzymology
2 publications, 2.06%
Journal of Molecular Structure
1 publication, 1.03%
Scientific Reports
1 publication, 1.03%
Biophysical Reviews
1 publication, 1.03%
Structure
1 publication, 1.03%
Archives of Biochemistry and Biophysics
1 publication, 1.03%
Biochemical and Biophysical Research Communications
1 publication, 1.03%
Trends in Biochemical Sciences
1 publication, 1.03%
Journal of Biological Chemistry
1 publication, 1.03%
FEBS Letters
1 publication, 1.03%
Magnetic Resonance in Chemistry
1 publication, 1.03%
ChemPhysChem
1 publication, 1.03%
NMR in Biomedicine
1 publication, 1.03%
Protein Science
1 publication, 1.03%
Magnetic Resonance in Medicine
1 publication, 1.03%
Accounts of Chemical Research
1 publication, 1.03%
1
2
3
4
5
6
7
8
9

Publishers

5
10
15
20
25
30
35
40
Elsevier
36 publications, 37.11%
American Chemical Society (ACS)
21 publications, 21.65%
Springer Nature
14 publications, 14.43%
Wiley
7 publications, 7.22%
MDPI
2 publications, 2.06%
Cambridge University Press
2 publications, 2.06%
American Society for Biochemistry and Molecular Biology
1 publication, 1.03%
Royal Society of Chemistry (RSC)
1 publication, 1.03%
Oxford University Press
1 publication, 1.03%
American Association for the Advancement of Science (AAAS)
1 publication, 1.03%
American Society for Microbiology
1 publication, 1.03%
Institute of Physics, Polish Academy of Sciences
1 publication, 1.03%
Cold Spring Harbor Laboratory
1 publication, 1.03%
5
10
15
20
25
30
35
40
  • We do not take into account publications without a DOI.
  • Statistics recalculated weekly.

Are you a researcher?

Create a profile to get free access to personal recommendations for colleagues and new articles.
Metrics
97
Share
Cite this
GOST |
Cite this
GOST Copy
Ishima R., Torchia D. A. Estimating the time scale of chemical exchange of proteins from measurements of transverse relaxation rates in solution // Journal of Biomolecular NMR. 1999. Vol. 14. No. 4. pp. 369-372.
GOST all authors (up to 50) Copy
Ishima R., Torchia D. A. Estimating the time scale of chemical exchange of proteins from measurements of transverse relaxation rates in solution // Journal of Biomolecular NMR. 1999. Vol. 14. No. 4. pp. 369-372.
RIS |
Cite this
RIS Copy
TY - JOUR
DO - 10.1023/A:1008324025406
UR - https://doi.org/10.1023/A:1008324025406
TI - Estimating the time scale of chemical exchange of proteins from measurements of transverse relaxation rates in solution
T2 - Journal of Biomolecular NMR
AU - Ishima, Rieko
AU - Torchia, Dennis A.
PY - 1999
DA - 1999/01/01
PB - Springer Nature
SP - 369-372
IS - 4
VL - 14
PMID - 10526408
SN - 0925-2738
SN - 1573-5001
ER -
BibTex |
Cite this
BibTex (up to 50 authors) Copy
@article{1999_Ishima,
author = {Rieko Ishima and Dennis A. Torchia},
title = {Estimating the time scale of chemical exchange of proteins from measurements of transverse relaxation rates in solution},
journal = {Journal of Biomolecular NMR},
year = {1999},
volume = {14},
publisher = {Springer Nature},
month = {jan},
url = {https://doi.org/10.1023/A:1008324025406},
number = {4},
pages = {369--372},
doi = {10.1023/A:1008324025406}
}
MLA
Cite this
MLA Copy
Ishima, Rieko, and Dennis A. Torchia. “Estimating the time scale of chemical exchange of proteins from measurements of transverse relaxation rates in solution.” Journal of Biomolecular NMR, vol. 14, no. 4, Jan. 1999, pp. 369-372. https://doi.org/10.1023/A:1008324025406.