Nature Structural Biology, volume 10, issue 2, pages 104-108

Structure of the L1 protuberance in the ribosome

Nikulin Alexei ¹

Eliseikina Irina ¹

Tishchenko Svetlana ¹

Nevskaya Natalia ¹

Davydova Natalia ¹

Platonova Olga ²

Piendl Wolfgang ²

Selmer Maria ³

Liljas Anders ³

Drygin Denis ⁴

Zimmermann Robert ⁴

Garber Maria ¹

Nikonov Stanislav ¹

Hide authors affiliations Show authors affiliations: 4 affiliations

Institute of Protein Research, Russian Academy of Sciences, Moscow Region, Russia |

Institute for Medical Chemistry and Biochemistry, Innsbruck, Austria |

University of Lund, Box 124, Lund, Sweden |

⁴

Department of Biochemistry and Molecular Biology and Program in Molecular and Cellular Biology, University of Massachusetts, Amherst, USA |

Publication type: Journal Article

Publication date: 2003-01-06

Springer Nature

Journal: Nature Structural Biology

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Impact factor: —

ISSN: 10728368

DOI: 10.1038/nsb886

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Biochemistry

Genetics

Structural Biology

Abstract

The L1 protuberance of the 50S ribosomal subunit is implicated in the release/disposal of deacylated tRNA from the E site. The apparent mobility of this ribosomal region has thus far prevented an accurate determination of its three-dimensional structure within either the 50S subunit or the 70S ribosome. Here we report the crystal structure at 2.65 Å resolution of ribosomal protein L1 from Sulfolobus acidocaldarius in complex with a specific 55-nucleotide fragment of 23S rRNA from Thermus thermophilus. This structure fills a major gap in current models of the 50S ribosomal subunit. The conformations of L1 and of the rRNA fragment differ dramatically from those within the crystallographic model of the T. thermophilus 70S ribosome. Incorporation of the L1–rRNA complex into the structural models of the T. thermophilus 70S ribosome and the Deinococcus radiodurans 50S subunit gives a reliable representation of most of the L1 protuberance within the ribosome.

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American Society for Biochemistry and Molecular Biology	American Society for Biochemistry and Molecular Biology, 1, 1.35% American Society for Biochemistry and Molecular Biology 1 publication, 1.35%
Royal Society of Chemistry (RSC)	Royal Society of Chemistry (RSC), 1, 1.35% Royal Society of Chemistry (RSC) 1 publication, 1.35%
Genetics Society of America	Genetics Society of America, 1, 1.35% Genetics Society of America 1 publication, 1.35%
American Association for the Advancement of Science (AAAS)	American Association for the Advancement of Science (AAAS), 1, 1.35% American Association for the Advancement of Science (AAAS) 1 publication, 1.35%
Proceedings of the National Academy of Sciences (PNAS)	Proceedings of the National Academy of Sciences (PNAS), 1, 1.35% Proceedings of the National Academy of Sciences (PNAS) 1 publication, 1.35%
eLife Sciences Publications	eLife Sciences Publications, 1, 1.35% eLife Sciences Publications 1 publication, 1.35%
	2 4 6 8 10 12 14 16

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Nikulin A. et al. Structure of the L1 protuberance in the ribosome // Nature Structural Biology. 2003. Vol. 10. No. 2. pp. 104-108.

GOST all authors (up to 50) Copy

Nikulin A., Eliseikina I., Tishchenko S., Nevskaya N., Davydova N., Platonova O., Piendl W., Selmer M., Liljas A., Drygin D., Zimmermann R., Garber M., Nikonov S. Structure of the L1 protuberance in the ribosome // Nature Structural Biology. 2003. Vol. 10. No. 2. pp. 104-108.

RIS |

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RIS Copy

TY - JOUR

DO - 10.1038/nsb886

UR - https://doi.org/10.1038%2Fnsb886

TI - Structure of the L1 protuberance in the ribosome

T2 - Nature Structural Biology

AU - Nikulin, Alexei

AU - Eliseikina, Irina

AU - Tishchenko, Svetlana

AU - Nevskaya, Natalia

AU - Davydova, Natalia

AU - Platonova, Olga

AU - Piendl, Wolfgang

AU - Selmer, Maria

AU - Liljas, Anders

AU - Drygin, Denis

AU - Zimmermann, Robert

AU - Garber, Maria

AU - Nikonov, Stanislav

PY - 2003

DA - 2003/01/06 00:00:00

PB - Springer Nature

SP - 104-108

IS - 2

VL - 10

SN - 1072-8368

ER -

BibTex |

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BibTex Copy

@article{2003_Nikulin,

author = {Alexei Nikulin and Irina Eliseikina and Svetlana Tishchenko and Natalia Nevskaya and Natalia Davydova and Olga Platonova and Wolfgang Piendl and Maria Selmer and Anders Liljas and Denis Drygin and Robert Zimmermann and Maria Garber and Stanislav Nikonov},

title = {Structure of the L1 protuberance in the ribosome},

journal = {Nature Structural Biology},

year = {2003},

volume = {10},

publisher = {Springer Nature},

month = {jan},

url = {https://doi.org/10.1038%2Fnsb886},

number = {2},

pages = {104--108},

doi = {10.1038/nsb886}

}

MLA

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Nikulin, Alexei, et al. “Structure of the L1 protuberance in the ribosome.” Nature Structural Biology, vol. 10, no. 2, Jan. 2003, pp. 104-108. https://doi.org/10.1038%2Fnsb886.

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Springer Nature

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Nature Structural Biology

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10728368 (Print)

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Laboratory of structural studies of the broadcasting apparatus

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