Nature Biotechnology

, volume 41 , issue 4 , pages 447-449

Integrative analysis of multimodal mass spectrometry data in MZmine 3

Robin Schmid ^{1, 2, 3}

Steffen Heuckeroth ²

Ansgar Korf ²

Aleksandr Smirnov ⁴

Owen Myers ⁴

Thomas S. Dyrlund ⁵

Roman Bushuiev ³

Kevin J. Murray ⁶

Nils Hoffmann ⁷

Miaoshan Lu ⁸

Abinesh Sarvepalli ⁹

Zheng Zhang ¹

Markus Fleischauer ¹⁰

Kai Dührkop ¹⁰

Mark Wesner ²

Shawn J. Hoogstra ¹¹

Edward Rudt ²

Olena Mokshyna ³

Corinna Brungs ³

Kirill Ponomarov ³

Lana Mutabdžija ³

Tito Damiani ³

Chris J. Pudney ¹²

Mark Earll ¹³

Patrick O. Helmer ²

Timothy R. Fallon ¹⁴

Tobias Schulze ¹⁵

Albert Rivas-Ubach ¹⁶

Aivett Bilbao ¹⁷

Henning Richter ¹⁸

Louis-Félix Nothias ¹⁹

Mingxun Wang ²⁰

Matej Orešič ^{21, 22}

Jing-Ke Weng ^{23, 24}

Sebastian Böcker ¹⁰

Astrid Jeibmann ²⁵

Heiko Hayen ²

Uwe Karst ²

Pieter C Dorrestein ¹

Daniel Petras ²⁶

Xiuxia Du ⁴

Tomáš Pluskal ³

Hide authors affiliations Show authors affiliations: 26 affiliations

Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, USA |

Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany |

Institute of Organic Chemistry and Biochemistry of The Czech Academy of Sciences, Prague, Czech Republic |

⁴

Department of Bioinformatics and Genomics, University of North Carolina At Charlotte, Charlotte, USA |

⁵

Steno diabetes Center Copenhagen, Gentofte, Denmark |

⁶

Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota - Twin Cities, Minneapolis, USA |

⁷

Institute for Bio- and Geosciences (IBG-5), Forschungszentrum Jülich GmbH, Jülich, Germany |

⁸

School of Engineering, WestLake University, Hangzhou, China |

⁹

BlockLab, Center for Large Datasystems Research, San Diego Supercomputer Center, La Jolla, USA |

¹⁰

Chair for Bioinformatics, Friedrich Schiller University Jena, Jena, Germany |

¹¹

Agriculture and Agri-Food Canada, London Research and Development centre, London, Canada |

¹²

Datacraft Technologies, Mosman Park, Washington, Australia |

¹³

Analytical Solutions Group, Product Technology and Engineering, Jealott’s Hill International Research Centre, Bracknell, UK |

¹⁴

Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California San Diego, La Jolla, USA

University of California, San Diego

Scripps Institution of Oceanography

¹⁵

Department of Effect-Directed Analysis, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany |

¹⁶

Ecology and Forest Genetics, Institute of Forest Sciences (ICIFOR-INIA-CSIC), Madrid, Spain |

¹⁷

Earth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, USA |

¹⁸

Clinic for Diagnostic Imaging, Diagnostic Imaging Research Unit (DIRU), University of Zurich, Zürich, Switzerland |

¹⁹

School of Pharmaceutical Sciences, University of Geneva, Geneva, Switzerland |

²⁰

Department of Computer Science, University of California Riverside, Riverside, USA |

²¹

School of medical Sciences, Örebro University, Örebro, Sweden |

²²

Turku Bioscience Centre, University of Turku and Åbo Akademi university, Turku, Finland |

²³

Whitehead Institute for Biomedical Research, Cambridge, USA |

²⁴

Department of Biology, Massachusetts Institute of Technology, Cambridge, USA |

²⁵

Institute of Neuropathology, University Hospital Münster, Münster, Germany |

²⁶

CMFI Cluster of Excellence, University of Tuebingen, Tuebingen, Germany |

Publication type: Journal Article

Publication date: 2023-03-01

Springer Nature

Nature Biotechnology

scimago Q1

wos Q1

SJR: 19.006

CiteScore: 58.8

Impact factor: 41.7

ISSN: 10870156, 15461696

DOI: 10.1038/s41587-023-01690-2

Copy DOI

PubMed ID: 36859716

Molecular Medicine

Applied Microbiology and Biotechnology

Biotechnology

Bioengineering

Biomedical Engineering

Found

2 citations

Hofmockel Kirsten

99 publications, 3 936 citations, 10 reviews

h-index: 29

Pacific Northwest National Laboratory

Iowa State University

1 citation

GREFF Stéphane

57 publications, 1 220 citations, 1 review

h-index: 21

Avignon University

Aix-Marseille University

Research interests

Metabolomics

1 citation

Kaiser Marcel

489 publications, 13 858 citations

h-index: 58

University of Basel

Swiss Tropical and Public Health Institute

1 citation

OGER Camille

66 publications, 511 citations, 2 reviews

h-index: 13

University of Montpellier

École Nationale Supérieure de Chimie de Montpellier

1 citation

Pup Elena

PhD in Biological/biomedical sciences

7 publications, 118 citations

h-index: 3

Wageningen University and Research Centre

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GOST |

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GOST Copy

Schmid R. et al. Integrative analysis of multimodal mass spectrometry data in MZmine 3 // Nature Biotechnology. 2023. Vol. 41. No. 4. pp. 447-449.

GOST all authors (up to 50) Copy

Schmid R., Heuckeroth S., Korf A., Smirnov A., Myers O., Dyrlund T. S., Bushuiev R., Murray K. J., Hoffmann N., Lu M., Sarvepalli A., Zhang Z., Fleischauer M., Dührkop K., Wesner M., Hoogstra S. J., Rudt E., Mokshyna O., Brungs C., Ponomarov K., Mutabdžija L., Damiani T., Pudney C. J., Earll M., Helmer P. O., Fallon T. R., Schulze T., Rivas-Ubach A., Bilbao A., Richter H., Nothias L., Wang M., Orešič M., Weng J., Böcker S., Jeibmann A., Hayen H., Karst U., Dorrestein P. C., Petras D., Du X., Pluskal T. Integrative analysis of multimodal mass spectrometry data in MZmine 3 // Nature Biotechnology. 2023. Vol. 41. No. 4. pp. 447-449.

RIS |

Cite this

RIS Copy

TY - JOUR

DO - 10.1038/s41587-023-01690-2

UR - https://doi.org/10.1038/s41587-023-01690-2

TI - Integrative analysis of multimodal mass spectrometry data in MZmine 3

T2 - Nature Biotechnology

AU - Schmid, Robin

AU - Heuckeroth, Steffen

AU - Korf, Ansgar

AU - Smirnov, Aleksandr

AU - Myers, Owen

AU - Dyrlund, Thomas S.

AU - Bushuiev, Roman

AU - Murray, Kevin J.

AU - Hoffmann, Nils

AU - Lu, Miaoshan

AU - Sarvepalli, Abinesh

AU - Zhang, Zheng

AU - Fleischauer, Markus

AU - Dührkop, Kai

AU - Wesner, Mark

AU - Hoogstra, Shawn J.

AU - Rudt, Edward

AU - Mokshyna, Olena

AU - Brungs, Corinna

AU - Ponomarov, Kirill

AU - Mutabdžija, Lana

AU - Damiani, Tito

AU - Pudney, Chris J.

AU - Earll, Mark

AU - Helmer, Patrick O.

AU - Fallon, Timothy R.

AU - Schulze, Tobias

AU - Rivas-Ubach, Albert

AU - Bilbao, Aivett

AU - Richter, Henning

AU - Nothias, Louis-Félix

AU - Wang, Mingxun

AU - Orešič, Matej

AU - Weng, Jing-Ke

AU - Böcker, Sebastian

AU - Jeibmann, Astrid

AU - Hayen, Heiko

AU - Karst, Uwe

AU - Dorrestein, Pieter C

AU - Petras, Daniel

AU - Du, Xiuxia

AU - Pluskal, Tomáš

PY - 2023

DA - 2023/03/01

PB - Springer Nature

SP - 447-449

IS - 4

VL - 41

PMID - 36859716

SN - 1087-0156

SN - 1546-1696

ER -

BibTex |

Cite this

BibTex (up to 50 authors) Copy

@article{2023_Schmid,

author = {Robin Schmid and Steffen Heuckeroth and Ansgar Korf and Aleksandr Smirnov and Owen Myers and Thomas S. Dyrlund and Roman Bushuiev and Kevin J. Murray and Nils Hoffmann and Miaoshan Lu and Abinesh Sarvepalli and Zheng Zhang and Markus Fleischauer and Kai Dührkop and Mark Wesner and Shawn J. Hoogstra and Edward Rudt and Olena Mokshyna and Corinna Brungs and Kirill Ponomarov and Lana Mutabdžija and Tito Damiani and Chris J. Pudney and Mark Earll and Patrick O. Helmer and Timothy R. Fallon and Tobias Schulze and Albert Rivas-Ubach and Aivett Bilbao and Henning Richter and Louis-Félix Nothias and Mingxun Wang and Matej Orešič and Jing-Ke Weng and Sebastian Böcker and Astrid Jeibmann and Heiko Hayen and Uwe Karst and Pieter C Dorrestein and Daniel Petras and Xiuxia Du and Tomáš Pluskal},

title = {Integrative analysis of multimodal mass spectrometry data in MZmine 3},

journal = {Nature Biotechnology},

year = {2023},

volume = {41},

publisher = {Springer Nature},

month = {mar},

url = {https://doi.org/10.1038/s41587-023-01690-2},

number = {4},

pages = {447--449},

doi = {10.1038/s41587-023-01690-2}

}

MLA

Cite this

MLA Copy

Schmid, Robin, et al. “Integrative analysis of multimodal mass spectrometry data in MZmine 3.” Nature Biotechnology, vol. 41, no. 4, Mar. 2023, pp. 447-449. https://doi.org/10.1038/s41587-023-01690-2.

Publisher

Springer Nature

Journal

Nature Biotechnology

scimago Q1

wos Q1

SJR

19.006

CiteScore

58.8

Impact factor

41.7

ISSN

10870156 (Print)

15461696 (Electronic)

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