Equilibrium molecular structure and spectra of 6-methyl-1,5-diazabicyclo[3.1.0]hexane: Joint analysis of gas phase electron diffraction, quantum chemistry, and spectroscopic data
L. S. Khaikin
1, 2, 3, 4, 5
,
Georgiy G Ageev
1, 2, 3, 4, 5
,
A. N. RYKOV
1, 2, 3, 4, 5
,
O. E. Grikina
1, 2, 3, 4, 5
,
Igor F. Shishkov
1, 2, 3, 4, 5
,
Ю. С. Лагутин
3, 4, 5, 6, 7
,
V. V. Kuznetsov
5, 8, 9, 10, 11
,
Nina N. Makhova
5, 8, 9, 10, 11
,
Sergei S Bukalov
4, 5, 10, 12, 13
,
Larisa A Leites
4, 5, 10, 12, 13
2
Chemistry department
4
Moscow
5
Russia
|
6
7
Research Computing Center
10
RUSSIAN ACADEMY OF SCIENCES
11
119991 Moscow
Publication type: Journal Article
Publication date: 2020-09-30
scimago Q2
wos Q2
SJR: 0.698
CiteScore: 5.3
Impact factor: 2.9
ISSN: 14639076, 14639084
PubMed ID:
32996973
Physical and Theoretical Chemistry
General Physics and Astronomy
Abstract
The equilibrium geometry of the boat conformation (Cs point group symmetry) of the 6-methyl-1,5-diazabicyclo[3.1.0]hexane (MDABH) molecule, absolutely dominating under normal conditions, was studied by the gas-phase electron diffraction (GED) method at 20 °C with the involvement of NMR, IR, and Raman spectroscopic data and quantum chemical calculations. The potential function of ring-puckering deformation for the MDABH bicyclic system was calculated at the MP2/aug-cc-pVTZ and B3LYP/cc-pVTZ levels. It was found by MP2 calculation that the total energy of the boat conformation is 3.52 kcal mol−1 lower than that of the chair conformation. For the first time, we recorded the IR and Raman spectra for liquid samples of MDABH and assigned their peculiarities only to boat conformation vibrations using the Pulay technique of scaling quantum chemical force fields. In the case of the chair form, transferability of the refined scale factors was used for reliable prediction of the location of its fundamental frequencies. According to the joint structural analysis of the above data, the most important equilibrium geometric re-parameters for the boat conformation of the MDABH molecule were determined to be (bond lengths in Å; angles in degrees, Cs symmetry): C2N1 = 1.466(2), C2C3 = 1.523(2), N1N5 = 1.512(2), C6N1 = 1.440(2), C6C7 = 1.487(2), ∠C2N1N5 = 106.1(2), ∠N1C2C3) = 110.2(4), ∠C2C3C4 = 99.9(4), ∠N1N5C6 = 58.3(1), ∠N1C6N5 = 63.3(1), ∠N1C6C7 = 114.9(6), ∠C6N1C2 = 111.8(1), ∠N5N1C2C3 = 17.3(1), ∠N1C2C3C4 = −26.8(2), θ = C2C3C4/C2N1N5C4 = −26.2(3), φ = N1C6N5/C2N1N5C4 = 74.0(1). Comparison of these and earlier results showed that the NN bond length in the diaziridine ring is very weakly dependent on the cis- or trans-arrangement of substituents at the nitrogen atoms.
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Khaikin L. S. et al. Equilibrium molecular structure and spectra of 6-methyl-1,5-diazabicyclo[3.1.0]hexane: Joint analysis of gas phase electron diffraction, quantum chemistry, and spectroscopic data // Physical Chemistry Chemical Physics. 2020. Vol. 22. No. 39. pp. 22477-22492.
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Khaikin L. S., Ageev G. G., RYKOV A. N., Grikina O. E., Shishkov I. F., Лагутин Ю. С., Kuznetsov V. V., Makhova N. N., Bukalov S. S., Leites L. A. Equilibrium molecular structure and spectra of 6-methyl-1,5-diazabicyclo[3.1.0]hexane: Joint analysis of gas phase electron diffraction, quantum chemistry, and spectroscopic data // Physical Chemistry Chemical Physics. 2020. Vol. 22. No. 39. pp. 22477-22492.
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TY - JOUR
DO - 10.1039/d0cp04005c
UR - https://xlink.rsc.org/?DOI=D0CP04005C
TI - Equilibrium molecular structure and spectra of 6-methyl-1,5-diazabicyclo[3.1.0]hexane: Joint analysis of gas phase electron diffraction, quantum chemistry, and spectroscopic data
T2 - Physical Chemistry Chemical Physics
AU - Khaikin, L. S.
AU - Ageev, Georgiy G
AU - RYKOV, A. N.
AU - Grikina, O. E.
AU - Shishkov, Igor F.
AU - Лагутин, Ю. С.
AU - Kuznetsov, V. V.
AU - Makhova, Nina N.
AU - Bukalov, Sergei S
AU - Leites, Larisa A
PY - 2020
DA - 2020/09/30
PB - Royal Society of Chemistry (RSC)
SP - 22477-22492
IS - 39
VL - 22
PMID - 32996973
SN - 1463-9076
SN - 1463-9084
ER -
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@article{2020_Khaikin,
author = {L. S. Khaikin and Georgiy G Ageev and A. N. RYKOV and O. E. Grikina and Igor F. Shishkov and Ю. С. Лагутин and V. V. Kuznetsov and Nina N. Makhova and Sergei S Bukalov and Larisa A Leites},
title = {Equilibrium molecular structure and spectra of 6-methyl-1,5-diazabicyclo[3.1.0]hexane: Joint analysis of gas phase electron diffraction, quantum chemistry, and spectroscopic data},
journal = {Physical Chemistry Chemical Physics},
year = {2020},
volume = {22},
publisher = {Royal Society of Chemistry (RSC)},
month = {sep},
url = {https://xlink.rsc.org/?DOI=D0CP04005C},
number = {39},
pages = {22477--22492},
doi = {10.1039/d0cp04005c}
}
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MLA
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Khaikin, L. S., et al. “Equilibrium molecular structure and spectra of 6-methyl-1,5-diazabicyclo[3.1.0]hexane: Joint analysis of gas phase electron diffraction, quantum chemistry, and spectroscopic data.” Physical Chemistry Chemical Physics, vol. 22, no. 39, Sep. 2020, pp. 22477-22492. https://xlink.rsc.org/?DOI=D0CP04005C.