volume 109 issue 2 pages 411-423

Double perturbation series in the differential equations of enzyme kinetics

Publication typeJournal Article
Publication date1998-07-08
scimago Q1
wos Q2
SJR0.819
CiteScore5.3
Impact factor3.1
ISSN00219606, 10897690
Physical and Theoretical Chemistry
General Physics and Astronomy
Abstract

The connection between combined singular and ordinary perturbation methods and slow-manifold theory is discussed using the Michaelis-Menten model of enzyme catalysis as an example. This two-step mechanism is described by a planar system of ordinary differential equations (ODEs) with a fast transient and a slow “steady-state” decay mode. The systems of scaled nonlinear ODEs for this mechanism contain a singular (η) and an ordinary (ε) perturbation parameter: η multiplies the velocity component of the fast variable and dominates the fast-mode perturbation series; ε controls the decay toward equilibrium and dominates the slow-mode perturbation series. However, higher order terms in both series contain η and ε. Finite series expansions partially decouple the system of ODEs into fast-mode and slow-mode ODEs; infinite series expansions completely decouple these ODEs. Correspondingly, any slow-mode ODE approximately describes motion on ℳ, the linelike slow manifold of the system, and in the infinite series limit this description is exact. Thus the perturbation treatment and the slow-manifold picture of the system are closely related. The functional equation for ℳ is solved automatically with the manipulative language MAPLE. The formal η and ε single perturbation expansions for the slow mode yield the same double (η,ε) perturbation series expressions to given order. Generalizations of this procedure are discussed.

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FRASER S. J. Double perturbation series in the differential equations of enzyme kinetics // Journal of Chemical Physics. 1998. Vol. 109. No. 2. pp. 411-423.
GOST all authors (up to 50) Copy
FRASER S. J. Double perturbation series in the differential equations of enzyme kinetics // Journal of Chemical Physics. 1998. Vol. 109. No. 2. pp. 411-423.
RIS |
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RIS Copy
TY - JOUR
DO - 10.1063/1.476578
UR - https://doi.org/10.1063/1.476578
TI - Double perturbation series in the differential equations of enzyme kinetics
T2 - Journal of Chemical Physics
AU - FRASER, SIMON J.
PY - 1998
DA - 1998/07/08
PB - AIP Publishing
SP - 411-423
IS - 2
VL - 109
SN - 0021-9606
SN - 1089-7690
ER -
BibTex |
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BibTex (up to 50 authors) Copy
@article{1998_FRASER,
author = {SIMON J. FRASER},
title = {Double perturbation series in the differential equations of enzyme kinetics},
journal = {Journal of Chemical Physics},
year = {1998},
volume = {109},
publisher = {AIP Publishing},
month = {jul},
url = {https://doi.org/10.1063/1.476578},
number = {2},
pages = {411--423},
doi = {10.1063/1.476578}
}
MLA
Cite this
MLA Copy
FRASER, SIMON J.. “Double perturbation series in the differential equations of enzyme kinetics.” Journal of Chemical Physics, vol. 109, no. 2, Jul. 1998, pp. 411-423. https://doi.org/10.1063/1.476578.