Open Access
RNA Biology, pages 1-7
RNA melting and RNA chaperone activities of plant cold shock domain proteins are not correlated
Zlobin Nikolay
1
,
Zlobin Nikolay E
1
,
Evlakov Konstantin
2
,
Tikhonova Olga
3
,
Babakov Aleksey
1
,
Publication type: Journal Article
Publication date: 2018-08-21
Journal:
RNA Biology
Quartile SCImago
Q2
Quartile WOS
Q2
Impact factor: 4.1
ISSN: 15476286, 15558584
Molecular Biology
Cell Biology
Abstract
Cold shock domain proteins (CSDPs) participate in plant development and resistance, but the underlying molecular mechanisms are poorly understood. In this study, we demonstrated that the CSDPs, including EsCSDP1, EsCSDP2, and EsCSDP3, from the extremophyte Eutrema salsugineum possess all basic properties of RNA chaperones. EsCSDP1-3 melt secondary structures in RNAs with various nucleotide sequences and exhibit RNA chaperone activity in vitro. EsCSDP1 and EsCSDP3 were shown to have higher RNA melting activity, whereasile EsCSDP2 had higher RNA chaperone activity. We demonstrated that higher RNA melting activity correlates with the longer C-terminal fragment in many zinc finger motifs, whereas increased RNA chaperone activity was most likely due to the higher glycine content and RGG repeat number in the C-terminal fragment.
Citations by journals
|
1
|
|
|
Agronomy
|
Agronomy
1 publication, 100%
|
|
1
|
Citations by publishers
|
1
|
|
|
Multidisciplinary Digital Publishing Institute (MDPI)
|
Multidisciplinary Digital Publishing Institute (MDPI)
1 publication, 100%
|
|
1
|
- We do not take into account publications that without a DOI.
- Statistics recalculated only for publications connected to researchers, organizations and labs registered on the platform.
- Statistics recalculated weekly.
{"yearsCitations":{"type":"bar","data":{"show":true,"labels":[2021],"ids":[0],"codes":[0],"imageUrls":[""],"datasets":[{"label":"Citations number","data":[1],"backgroundColor":["#3B82F6"],"percentage":["100"],"barThickness":null}]},"options":{"indexAxis":"x","maintainAspectRatio":true,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":1,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Citations per year","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}},"journals":{"type":"bar","data":{"show":true,"labels":["Agronomy"],"ids":[8267],"codes":[0],"imageUrls":["\/storage\/images\/resized\/MjH1ITP7lMYGxeqUZfkt2BnVLgjkk413jwBV97XX_medium.webp"],"datasets":[{"label":"","data":[1],"backgroundColor":["#3B82F6"],"percentage":[100],"barThickness":13}]},"options":{"indexAxis":"y","maintainAspectRatio":false,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":null,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Journals","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}},"publishers":{"type":"bar","data":{"show":true,"labels":["Multidisciplinary Digital Publishing Institute (MDPI)"],"ids":[202],"codes":[0],"imageUrls":["\/storage\/images\/resized\/MjH1ITP7lMYGxeqUZfkt2BnVLgjkk413jwBV97XX_medium.webp"],"datasets":[{"label":"","data":[1],"backgroundColor":["#3B82F6"],"percentage":[100],"barThickness":13}]},"options":{"indexAxis":"y","maintainAspectRatio":false,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":null,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Publishers","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}}}
Metrics
Cite this
GOST |
RIS |
BibTex
Cite this
GOST
Copy
Zlobin N. et al. RNA melting and RNA chaperone activities of plant cold shock domain proteins are not correlated // RNA Biology. 2018. pp. 1-7.
GOST all authors (up to 50)
Copy
Zlobin N., Zlobin N. E., Evlakov K., Tikhonova O., Babakov A., Taranov V. RNA melting and RNA chaperone activities of plant cold shock domain proteins are not correlated // RNA Biology. 2018. pp. 1-7.
Cite this
RIS
Copy
TY - JOUR
DO - 10.1080/15476286.2018.1506681
UR - https://doi.org/10.1080%2F15476286.2018.1506681
TI - RNA melting and RNA chaperone activities of plant cold shock domain proteins are not correlated
T2 - RNA Biology
AU - Zlobin, Nikolay
AU - Evlakov, Konstantin
AU - Tikhonova, Olga
AU - Babakov, Aleksey
AU - Taranov, Vasiliy
AU - Zlobin, Nikolay E
PY - 2018
DA - 2018/08/21 00:00:00
PB - Taylor & Francis
SP - 1-7
SN - 1547-6286
SN - 1555-8584
ER -
Cite this
BibTex
Copy
@article{2018_Zlobin,
author = {Nikolay Zlobin and Konstantin Evlakov and Olga Tikhonova and Aleksey Babakov and Vasiliy Taranov and Nikolay E Zlobin},
title = {RNA melting and RNA chaperone activities of plant cold shock domain proteins are not correlated},
journal = {RNA Biology},
year = {2018},
publisher = {Taylor & Francis},
month = {aug},
url = {https://doi.org/10.1080%2F15476286.2018.1506681},
pages = {1--7},
doi = {10.1080/15476286.2018.1506681}
}