Multipole models of sulphur for accurate anisotropic electrostatic interactions within force fields
Тип публикации: Journal Article
Дата публикации: 2017-12-19
scimago Q3
wos Q2
БС1
SJR: 0.342
CiteScore: 4.2
Impact factor: 2.4
ISSN: 1062936X, 1029046X, 1026776X
PubMed ID:
29254381
Drug Discovery
General Medicine
Molecular Medicine
Bioengineering
Краткое описание
Nowadays, as computing has become much more available, a fresh momentum has been observed in the field of re-visioning and re-parameterizing the usual tools, as well as estimating for the incorporation of new qualitative capabilities, aimed at making more accurate and reliable predictions in drug discovery processes. Inspired by the success of modelling the electrostatic part of the halogen bonding (XB) by means of the distributed multipole expansion, a study is presented which attempts to extend this approach to a tougher case of σ-hole interaction: sulphur-based chalcogen bonding. To that end, 11 anisotropic models have been derived and tested for their performance in the reproduction of reference ab initio molecular electrostatic potential. A careful examination resulted in three models which have been selected for further examination as a part of the molecular mechanics force field (GAFF). The combined force field was used to estimate inter- and intra-molecular interactions for the molecular systems, capable of differentiating the binding from the σ-hole and other directions. The anisotropic models proposed were generally able to correct the wrong predictions of the sulphur models based only on isotropic charges and, thus, are a promising direction for further development of the refined electrostatics force fields.
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Shulga D. A. et al. Multipole models of sulphur for accurate anisotropic electrostatic interactions within force fields // SAR and QSAR in Environmental Research. 2017. Vol. 29. No. 1. pp. 21-42.
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Shulga D. A., Titov O. I., Pisarev S. A., Palyulin V. A. Multipole models of sulphur for accurate anisotropic electrostatic interactions within force fields // SAR and QSAR in Environmental Research. 2017. Vol. 29. No. 1. pp. 21-42.
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TY - JOUR
DO - 10.1080/1062936x.2017.1406403
UR - https://www.tandfonline.com/doi/full/10.1080/1062936X.2017.1406403
TI - Multipole models of sulphur for accurate anisotropic electrostatic interactions within force fields
T2 - SAR and QSAR in Environmental Research
AU - Shulga, D A
AU - Titov, O I
AU - Pisarev, S A
AU - Palyulin, V. A.
PY - 2017
DA - 2017/12/19
PB - Taylor & Francis
SP - 21-42
IS - 1
VL - 29
PMID - 29254381
SN - 1062-936X
SN - 1029-046X
SN - 1026-776X
ER -
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@article{2017_Shulga,
author = {D A Shulga and O I Titov and S A Pisarev and V. A. Palyulin},
title = {Multipole models of sulphur for accurate anisotropic electrostatic interactions within force fields},
journal = {SAR and QSAR in Environmental Research},
year = {2017},
volume = {29},
publisher = {Taylor & Francis},
month = {dec},
url = {https://www.tandfonline.com/doi/full/10.1080/1062936X.2017.1406403},
number = {1},
pages = {21--42},
doi = {10.1080/1062936x.2017.1406403}
}
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Shulga, D. A., et al. “Multipole models of sulphur for accurate anisotropic electrostatic interactions within force fields.” SAR and QSAR in Environmental Research, vol. 29, no. 1, Dec. 2017, pp. 21-42. https://www.tandfonline.com/doi/full/10.1080/1062936X.2017.1406403.