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volume 9 issue 2 pages 42

Mathematical analysis of a prototypical autocatalytic reaction network

Publication typeJournal Article
Publication date2019-05-20
scimago Q1
wos Q1
SJR0.824
CiteScore6.0
Impact factor3.4
ISSN20751729
PubMed ID:  31137534
General Biochemistry, Genetics and Molecular Biology
Ecology, Evolution, Behavior and Systematics
Paleontology
Space and Planetary Science
Abstract

Network autocatalysis, which is autocatalysis whereby a catalyst is not directly produced in a catalytic cycle, is likely to be more common in chemistry than direct autocatalysis is. Nevertheless, the kinetics of autocatalytic networks often does not exactly follow simple quadratic or cubic rate laws and largely depends on the structure of the network. In this article, we analyzed one of the simplest and most chemically plausible autocatalytic networks where a catalytic cycle is coupled to an ancillary reaction that produces the catalyst. We analytically analyzed deviations in the kinetics of this network from its exponential growth and numerically studied the competition between two networks for common substrates. Our results showed that when quasi-steady-state approximation is applicable for at least one of the components, the deviation from the exponential growth is small. Numerical simulations showed that competition between networks results in the mutual exclusion of autocatalysts; however, the presence of a substantial noncatalytic conversion of substrates will create broad regions where autocatalysts can coexist. Thus, we should avoid the accumulation of intermediates and the noncatalytic conversion of the substrate when designing experimental systems that need autocatalysis as a source of positive feedback or as a source of evolutionary pressure.

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GOST Copy
Skorb E. V., Semenov S. N. Mathematical analysis of a prototypical autocatalytic reaction network // Life. 2019. Vol. 9. No. 2. p. 42.
GOST all authors (up to 50) Copy
Skorb E. V., Semenov S. N. Mathematical analysis of a prototypical autocatalytic reaction network // Life. 2019. Vol. 9. No. 2. p. 42.
RIS |
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RIS Copy
TY - JOUR
DO - 10.3390/life9020042
UR - https://doi.org/10.3390/life9020042
TI - Mathematical analysis of a prototypical autocatalytic reaction network
T2 - Life
AU - Skorb, Ekaterina V
AU - Semenov, Sergey N
PY - 2019
DA - 2019/05/20
PB - MDPI
SP - 42
IS - 2
VL - 9
PMID - 31137534
SN - 2075-1729
ER -
BibTex |
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BibTex (up to 50 authors) Copy
@article{2019_Skorb,
author = {Ekaterina V Skorb and Sergey N Semenov},
title = {Mathematical analysis of a prototypical autocatalytic reaction network},
journal = {Life},
year = {2019},
volume = {9},
publisher = {MDPI},
month = {may},
url = {https://doi.org/10.3390/life9020042},
number = {2},
pages = {42},
doi = {10.3390/life9020042}
}
MLA
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MLA Copy
Skorb, Ekaterina V., and Sergey N Semenov. “Mathematical analysis of a prototypical autocatalytic reaction network.” Life, vol. 9, no. 2, May. 2019, p. 42. https://doi.org/10.3390/life9020042.