Journal of Chemical Theory and Computation, volume 5, issue 7, pages 1895-1906
Quantum chemical benchmark studies of the electronic properties of the green fluorescent protein chromophore. 1. Electronically excited and ionized states of the anionic chromophore in the gas phase
Publication type: Journal Article
Publication date: 2009-06-25
Quartile SCImago
Q1
Quartile WOS
Q1
Impact factor: 5.5
ISSN: 15499618, 15499626
Physical and Theoretical Chemistry
Computer Science Applications
Abstract
We present the results of quantum chemical calculations of the electronic properties of the anionic form of the green fluorescent protein chromophore in the gas phase. The vertical detachment energy of the chromophore is found to be 2.4-2.5 eV, which is below the strongly absorbing ππ* state at 2.6 eV. The vertical excitation of the lowest triplet state is around 1.9 eV, which is below the photodetachment continuum. Thus, the lowest bright singlet state is a resonance state embedded in the photodetachment continuum, whereas the lowest triplet state is a regular bound state. Based on our estimation of the vertical detachment energy, we attribute a minor feature in the action spectrum as due to the photodetachment transition. The benchmark results for the bright ππ* state demonstrated that the scaled opposite-spin method yields vertical excitation within 0.1 eV (20 nm) from the experimental maximum at 2.59 eV (479 nm). We also report estimations of the vertical excitation energy obtained with the equation-of-motion coupled cluster with the singles and doubles method, a multireference perturbation theory corrected approach MRMP2 as well as the time-dependent density functional theory with range-separated functionals. Expanding the basis set with diffuse functions lowers the ππ* vertical excitation energy by 0.1 eV at the same time revealing a continuum of "ionized" states, which embeds the bright ππ* transition.
Citations by journals
2
4
6
8
10
12
14
16
|
|
Journal of Chemical Physics
|
Journal of Chemical Physics
16 publications, 15.38%
|
Journal of Chemical Theory and Computation
|
Journal of Chemical Theory and Computation
15 publications, 14.42%
|
Journal of Physical Chemistry B
|
Journal of Physical Chemistry B
11 publications, 10.58%
|
Physical Chemistry Chemical Physics
|
Physical Chemistry Chemical Physics
10 publications, 9.62%
|
Journal of Physical Chemistry Letters
|
Journal of Physical Chemistry Letters
7 publications, 6.73%
|
Journal of Computational Chemistry
|
Journal of Computational Chemistry
6 publications, 5.77%
|
Journal of Physical Chemistry A
|
Journal of Physical Chemistry A
4 publications, 3.85%
|
International Journal of Mass Spectrometry
|
International Journal of Mass Spectrometry
2 publications, 1.92%
|
Computational and Theoretical Chemistry
|
Computational and Theoretical Chemistry
2 publications, 1.92%
|
ChemPhysChem
|
ChemPhysChem
2 publications, 1.92%
|
International Journal of Quantum Chemistry
|
International Journal of Quantum Chemistry
2 publications, 1.92%
|
Journal of the American Chemical Society
|
Journal of the American Chemical Society
2 publications, 1.92%
|
Journal of Physical Chemistry C
|
Journal of Physical Chemistry C
2 publications, 1.92%
|
Proteins: Structure, Function and Genetics
|
Proteins: Structure, Function and Genetics
1 publication, 0.96%
|
Accounts of Chemical Research
|
Accounts of Chemical Research
1 publication, 0.96%
|
Biophysical Chemistry
|
Biophysical Chemistry
1 publication, 0.96%
|
Interdisciplinary sciences, computational life sciences
|
Interdisciplinary sciences, computational life sciences
1 publication, 0.96%
|
Journal of Fluorescence
|
Journal of Fluorescence
1 publication, 0.96%
|
Theoretical Chemistry Accounts
|
Theoretical Chemistry Accounts
1 publication, 0.96%
|
Scientific Reports
|
Scientific Reports
1 publication, 0.96%
|
Materials Today Chemistry
|
Materials Today Chemistry
1 publication, 0.96%
|
Chemical Physics Letters
|
Chemical Physics Letters
1 publication, 0.96%
|
Photochemistry and Photobiology
|
Photochemistry and Photobiology
1 publication, 0.96%
|
Nano Letters
|
Nano Letters
1 publication, 0.96%
|
Inorganic Chemistry
|
Inorganic Chemistry
1 publication, 0.96%
|
Chemical Reviews
|
Chemical Reviews
1 publication, 0.96%
|
Annual Reports Section C (Physical Chemistry)
|
Annual Reports Section C (Physical Chemistry)
1 publication, 0.96%
|
Chemical Science
|
Chemical Science
1 publication, 0.96%
|
Molecular Physics
|
Molecular Physics
1 publication, 0.96%
|
2
4
6
8
10
12
14
16
|
Citations by publishers
5
10
15
20
25
30
35
40
45
|
|
American Chemical Society (ACS)
|
American Chemical Society (ACS)
45 publications, 43.27%
|
American Institute of Physics (AIP)
|
American Institute of Physics (AIP)
16 publications, 15.38%
|
Wiley
|
Wiley
13 publications, 12.5%
|
Royal Society of Chemistry (RSC)
|
Royal Society of Chemistry (RSC)
13 publications, 12.5%
|
Elsevier
|
Elsevier
7 publications, 6.73%
|
Springer Nature
|
Springer Nature
5 publications, 4.81%
|
Taylor & Francis
|
Taylor & Francis
2 publications, 1.92%
|
5
10
15
20
25
30
35
40
45
|
- We do not take into account publications that without a DOI.
- Statistics recalculated only for publications connected to researchers, organizations and labs registered on the platform.
- Statistics recalculated weekly.
{"yearsCitations":{"type":"bar","data":{"show":true,"labels":[2009,2010,2011,2012,2013,2014,2015,2016,2017,2018,2019,2020,2021,2022,2023],"ids":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0],"codes":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0],"imageUrls":["","","","","","","","","","","","","","",""],"datasets":[{"label":"Citations number","data":[6,6,15,16,8,8,7,7,10,8,3,3,5,1,1],"backgroundColor":["#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6"],"percentage":["5.77","5.77","14.42","15.38","7.69","7.69","6.73","6.73","9.62","7.69","2.88","2.88","4.81","0.96","0.96"],"barThickness":null}]},"options":{"indexAxis":"x","maintainAspectRatio":true,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":1,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Citations per year","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}},"journals":{"type":"bar","data":{"show":true,"labels":["Journal of Chemical Physics","Journal of Chemical Theory and Computation","Journal of Physical Chemistry B","Physical Chemistry Chemical Physics","Journal of Physical Chemistry Letters","Journal of Computational Chemistry","Journal of Physical Chemistry A","International Journal of Mass Spectrometry","Computational and Theoretical Chemistry","ChemPhysChem","International Journal of Quantum Chemistry","Journal of the American Chemical Society","Journal of Physical Chemistry C","Proteins: Structure, Function and Genetics","Accounts of Chemical Research","Biophysical Chemistry","Interdisciplinary sciences, computational life sciences","Journal of Fluorescence","Theoretical Chemistry Accounts","Scientific Reports","Materials Today Chemistry","Chemical Physics Letters","Photochemistry and Photobiology","Nano Letters","Inorganic Chemistry","Chemical Reviews","Annual Reports Section C (Physical Chemistry)","Chemical Science","Molecular Physics"],"ids":[544,58,14990,1773,21963,423,15255,6811,12461,16306,15897,4813,8859,19687,1526,9050,18598,21006,19212,13767,1350,5579,2408,10312,24714,13718,25590,9646,22688],"codes":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0],"imageUrls":["\/storage\/images\/resized\/ARM4e6URKRsbRZvIF0vFis9DjxGloBjnBYJXbHmZ_medium.webp","\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp","\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp","\/storage\/images\/resized\/leiAYcRDGTSl5B1eCnwpSGqmDEUEfDPPoYisFGhT_medium.webp","\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp","\/storage\/images\/resized\/bRyGpdm98BkAUYiK1YFNpl5Z7hPu6Gd87gbIeuG3_medium.webp","\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp","\/storage\/images\/resized\/GDnYOu1UpMMfMMRV6Aqle4H0YLLsraeD9IP9qScG_medium.webp","\/storage\/images\/resized\/GDnYOu1UpMMfMMRV6Aqle4H0YLLsraeD9IP9qScG_medium.webp","\/storage\/images\/resized\/bRyGpdm98BkAUYiK1YFNpl5Z7hPu6Gd87gbIeuG3_medium.webp","\/storage\/images\/resized\/bRyGpdm98BkAUYiK1YFNpl5Z7hPu6Gd87gbIeuG3_medium.webp","\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp","\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp","\/storage\/images\/resized\/bRyGpdm98BkAUYiK1YFNpl5Z7hPu6Gd87gbIeuG3_medium.webp","\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp","\/storage\/images\/resized\/GDnYOu1UpMMfMMRV6Aqle4H0YLLsraeD9IP9qScG_medium.webp","\/storage\/images\/resized\/voXLqlsvTwv5p3iMQ8Dhs95nqB4AXOG7Taj7G4ra_medium.webp","\/storage\/images\/resized\/voXLqlsvTwv5p3iMQ8Dhs95nqB4AXOG7Taj7G4ra_medium.webp","\/storage\/images\/resized\/voXLqlsvTwv5p3iMQ8Dhs95nqB4AXOG7Taj7G4ra_medium.webp","\/storage\/images\/resized\/voXLqlsvTwv5p3iMQ8Dhs95nqB4AXOG7Taj7G4ra_medium.webp","\/storage\/images\/resized\/GDnYOu1UpMMfMMRV6Aqle4H0YLLsraeD9IP9qScG_medium.webp","\/storage\/images\/resized\/GDnYOu1UpMMfMMRV6Aqle4H0YLLsraeD9IP9qScG_medium.webp","\/storage\/images\/resized\/bRyGpdm98BkAUYiK1YFNpl5Z7hPu6Gd87gbIeuG3_medium.webp","\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp","\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp","\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp","\/storage\/images\/resized\/leiAYcRDGTSl5B1eCnwpSGqmDEUEfDPPoYisFGhT_medium.webp","\/storage\/images\/resized\/leiAYcRDGTSl5B1eCnwpSGqmDEUEfDPPoYisFGhT_medium.webp","\/storage\/images\/resized\/5YZtvLvkPZuc2JHOaZsjCvGSHFCuC3drUwN3YAc5_medium.webp"],"datasets":[{"label":"","data":[16,15,11,10,7,6,4,2,2,2,2,2,2,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1],"backgroundColor":["#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6"],"percentage":[15.38,14.42,10.58,9.62,6.73,5.77,3.85,1.92,1.92,1.92,1.92,1.92,1.92,0.96,0.96,0.96,0.96,0.96,0.96,0.96,0.96,0.96,0.96,0.96,0.96,0.96,0.96,0.96,0.96],"barThickness":13}]},"options":{"indexAxis":"y","maintainAspectRatio":false,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":null,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Journals","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}},"publishers":{"type":"bar","data":{"show":true,"labels":["American Chemical Society (ACS)","American Institute of Physics (AIP)","Wiley","Royal Society of Chemistry (RSC)","Elsevier","Springer Nature","Taylor & Francis"],"ids":[40,250,11,123,17,8,18],"codes":[0,0,0,0,0,0,0],"imageUrls":["\/storage\/images\/resized\/iLiQsFqFaSEx6chlGQ5fbAwF6VYU3WWa08hkss0g_medium.webp","\/storage\/images\/resized\/ARM4e6URKRsbRZvIF0vFis9DjxGloBjnBYJXbHmZ_medium.webp","\/storage\/images\/resized\/bRyGpdm98BkAUYiK1YFNpl5Z7hPu6Gd87gbIeuG3_medium.webp","\/storage\/images\/resized\/leiAYcRDGTSl5B1eCnwpSGqmDEUEfDPPoYisFGhT_medium.webp","\/storage\/images\/resized\/GDnYOu1UpMMfMMRV6Aqle4H0YLLsraeD9IP9qScG_medium.webp","\/storage\/images\/resized\/voXLqlsvTwv5p3iMQ8Dhs95nqB4AXOG7Taj7G4ra_medium.webp","\/storage\/images\/resized\/5YZtvLvkPZuc2JHOaZsjCvGSHFCuC3drUwN3YAc5_medium.webp"],"datasets":[{"label":"","data":[45,16,13,13,7,5,2],"backgroundColor":["#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6","#3B82F6"],"percentage":[43.27,15.38,12.5,12.5,6.73,4.81,1.92],"barThickness":13}]},"options":{"indexAxis":"y","maintainAspectRatio":false,"scales":{"y":{"ticks":{"precision":0,"autoSkip":false,"font":{"family":"Montserrat"},"color":"#000000"}},"x":{"ticks":{"stepSize":null,"precision":0,"font":{"family":"Montserrat"},"color":"#000000"}}},"plugins":{"legend":{"position":"top","labels":{"font":{"family":"Montserrat"},"color":"#000000"}},"title":{"display":true,"text":"Publishers","font":{"size":24,"family":"Montserrat","weight":600},"color":"#000000"}}}}}
Metrics
Cite this
GOST |
RIS |
BibTex |
MLA
Cite this
GOST
Copy
Epifanovsky E. et al. Quantum chemical benchmark studies of the electronic properties of the green fluorescent protein chromophore. 1. Electronically excited and ionized states of the anionic chromophore in the gas phase // Journal of Chemical Theory and Computation. 2009. Vol. 5. No. 7. pp. 1895-1906.
GOST all authors (up to 50)
Copy
Epifanovsky E., Polyakov I., Grigorenko B., Nemukhin A., Krylov A. I. Quantum chemical benchmark studies of the electronic properties of the green fluorescent protein chromophore. 1. Electronically excited and ionized states of the anionic chromophore in the gas phase // Journal of Chemical Theory and Computation. 2009. Vol. 5. No. 7. pp. 1895-1906.
Cite this
RIS
Copy
TY - JOUR
DO - 10.1021/ct900143j
UR - https://doi.org/10.1021%2Fct900143j
TI - Quantum chemical benchmark studies of the electronic properties of the green fluorescent protein chromophore. 1. Electronically excited and ionized states of the anionic chromophore in the gas phase
T2 - Journal of Chemical Theory and Computation
AU - Polyakov, Igor
AU - Epifanovsky, Evgeny
AU - Grigorenko, Bella
AU - Nemukhin, Alexander
AU - Krylov, Anna I.
PY - 2009
DA - 2009/06/25 00:00:00
PB - American Chemical Society (ACS)
SP - 1895-1906
IS - 7
VL - 5
SN - 1549-9618
SN - 1549-9626
ER -
Cite this
BibTex
Copy
@article{2009_Epifanovsky,
author = {Igor Polyakov and Evgeny Epifanovsky and Bella Grigorenko and Alexander Nemukhin and Anna I. Krylov},
title = {Quantum chemical benchmark studies of the electronic properties of the green fluorescent protein chromophore. 1. Electronically excited and ionized states of the anionic chromophore in the gas phase},
journal = {Journal of Chemical Theory and Computation},
year = {2009},
volume = {5},
publisher = {American Chemical Society (ACS)},
month = {jun},
url = {https://doi.org/10.1021%2Fct900143j},
number = {7},
pages = {1895--1906},
doi = {10.1021/ct900143j}
}
Cite this
MLA
Copy
Epifanovsky, Evgeny, et al. “Quantum chemical benchmark studies of the electronic properties of the green fluorescent protein chromophore. 1. Electronically excited and ionized states of the anionic chromophore in the gas phase.” Journal of Chemical Theory and Computation, vol. 5, no. 7, Jun. 2009, pp. 1895-1906. https://doi.org/10.1021%2Fct900143j.