Two-dimensional classification of amphiphilic monomers based on interfacial and partitioning properties. 2. Amino acids and amino acid residues
Ivan M Okhapkin
1, 2
,
Andrei A. Askadskii
1
,
Vladimir A Markov
3
,
Elena E. Makhaeva
3
,
Alexei R. Khokhlov
2, 3
Publication type: Journal Article
Publication date: 2006-01-31
scimago Q2
wos Q3
SJR: 0.431
CiteScore: 4.5
Impact factor: 2.3
ISSN: 0303402X, 14351536
Materials Chemistry
Physical and Theoretical Chemistry
Colloid and Surface Chemistry
Polymers and Plastics
Abstract
A new classification for amino acid residues is proposed, based on interfacial and partitioning properties. Amino acid residues are characterized by two parameters: standard free energy of adsorption at the hexane/water interface and standard free energy of the partition between hexane and water. Theoretical approaches are used for the estimation of these parameters. As a result, several groups of amino acid units having close values of the parameters are distinguished. Classification of the amino acid units by such a method is believed to be able to provide promising results in the search of correlations in protein sequences. The comparison of experimental and theoretical studies of free amino acids at the hexane/water interface confirm the predictive power of the theory used, because a very good coincidence between theoretical and experimental data points is observed. The obtained values of standard free energies of adsorption are consistent with literature data.
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Total citations:
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Citations from 2024:
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(3.23%)
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Okhapkin I. M. et al. Two-dimensional classification of amphiphilic monomers based on interfacial and partitioning properties. 2. Amino acids and amino acid residues // Colloid and Polymer Science. 2006. Vol. 284. No. 6. pp. 575-585.
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Okhapkin I. M., Askadskii A. A., Markov V. A., Makhaeva E. E., Khokhlov A. R. Two-dimensional classification of amphiphilic monomers based on interfacial and partitioning properties. 2. Amino acids and amino acid residues // Colloid and Polymer Science. 2006. Vol. 284. No. 6. pp. 575-585.
Cite this
RIS
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TY - JOUR
DO - 10.1007/s00396-005-1447-6
UR - https://doi.org/10.1007/s00396-005-1447-6
TI - Two-dimensional classification of amphiphilic monomers based on interfacial and partitioning properties. 2. Amino acids and amino acid residues
T2 - Colloid and Polymer Science
AU - Okhapkin, Ivan M
AU - Askadskii, Andrei A.
AU - Markov, Vladimir A
AU - Makhaeva, Elena E.
AU - Khokhlov, Alexei R.
PY - 2006
DA - 2006/01/31
PB - Springer Nature
SP - 575-585
IS - 6
VL - 284
SN - 0303-402X
SN - 1435-1536
ER -
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BibTex (up to 50 authors)
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@article{2006_Okhapkin,
author = {Ivan M Okhapkin and Andrei A. Askadskii and Vladimir A Markov and Elena E. Makhaeva and Alexei R. Khokhlov},
title = {Two-dimensional classification of amphiphilic monomers based on interfacial and partitioning properties. 2. Amino acids and amino acid residues},
journal = {Colloid and Polymer Science},
year = {2006},
volume = {284},
publisher = {Springer Nature},
month = {jan},
url = {https://doi.org/10.1007/s00396-005-1447-6},
number = {6},
pages = {575--585},
doi = {10.1007/s00396-005-1447-6}
}
Cite this
MLA
Copy
Okhapkin, Ivan M., et al. “Two-dimensional classification of amphiphilic monomers based on interfacial and partitioning properties. 2. Amino acids and amino acid residues.” Colloid and Polymer Science, vol. 284, no. 6, Jan. 2006, pp. 575-585. https://doi.org/10.1007/s00396-005-1447-6.
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