Phylogenomics and the rise of the angiosperms
Alexandre Rizzo Zuntini
1
,
Tom Carruthers
1
,
OLIVIER MAURIN
1
,
Paul Bailey
1
,
Kevin Leempoel
1
,
Grace E Brewer
1
,
Niroshini Epitawalage
1
,
Elaine Françoso
1, 2
,
Berta Gallego
1
,
Catherine Mcginnie
1
,
RAQUEL NEGRÃO
1
,
Shyamali R Roy
1
,
Lalita Simpson
3
,
Eduardo Toledo Romero
1
,
Vanessa M. A. Barber
1
,
Laura Botigué
4
,
James J. Clarkson
1
,
Robyn S Cowan
1
,
Steven Dodsworth
5
,
MATTHEW JOHNSON
6
,
JAN T. KIM
7
,
Lisa Pokorny
1, 8
,
NORMAN J. WICKETT
9
,
GUILHERME MEDEIROS ANTAR
10, 11
,
Lucinda DeBolt
12
,
Karime Gutierrez
12
,
Kasper Hendriks
13, 14
,
Alina Hoewener
15
,
AI-QUN HU
1
,
Elizabeth M. Joyce
3, 16
,
Izai A B S Kikuchi
17
,
Isabel Larridon
1
,
Drew A Larson
18
,
Elton John de Lírio
10
,
Jing-Xia Liu
19
,
Panagiota Malakasi
1
,
Natalia A S Przelomska
1, 5
,
Toral Shah
1
,
Juan Viruel
1
,
Theodore R. Allnutt
20
,
G. K. Ameka
21
,
Rose L. Andrew
22
,
Marc S Appelhans
23
,
Montserrat Arista
24
,
María Jesús Ariza
25
,
Juan Arroyo
24
,
Watchara Arthan
1
,
Julien B. Bachelier
26
,
C. Donovan Bailey
27
,
Helen F. Barnes
20
,
Matthew D. Barrett
3
,
RUSSELL L. BARRETT
28
,
Randall J Bayer
29
,
MICHAEL J. BAYLY
30
,
Ed Biffin
31
,
Nicky Biggs
1
,
Joanne L. Birch
30
,
Diego Bogarín
14, 32
,
Renata Borosova
1
,
Alexander M C Bowles
33
,
Peter C Boyce
34
,
Gemma L C Bramley
1
,
Marie Briggs
1
,
Linda M Broadhurst
35
,
Gillian K. Brown
36
,
Jeremy J. Bruhl
22
,
Anne Bruneau
37
,
Sven Buerki
38
,
Edie Burns
1
,
Margaret Byrne
39
,
Stuart Cable
1
,
Ainsley Calladine
31
,
MARTIN W. CALLMANDER
40
,
ÁNGELA CANO
41
,
David J. Cantrill
20
,
Warren M. Cardinal-McTeague
42
,
Mónica M Carlsen
43
,
Abigail J. A. Carruthers
1
,
Alejandra de Castro Mateo
24
,
MARK CHASE
1, 44
,
Lars W. Chatrou
45
,
Martin Cheek
1
,
Shilin Chen
46, 47
,
MAARTEN J.M. CHRISTENHUSZ
1, 48, 49
,
Pascal-Antoine Christin
50
,
Mark A. Clements
35
,
Skye C. Coffey
51
,
John G. Conran
52
,
Xavier Cornejo
53
,
Thomas L. P. Couvreur
54
,
Ian D. Cowie
55
,
Laszlo Csiba
1
,
IAIN DARBYSHIRE
1
,
Gerrit Davidse
43
,
Nina M. J. Davies
1
,
Aaron P. Davis
1
,
Kor-jent van Dijk
56
,
STEPHEN R. DOWNIE
57
,
Marco F. Duretto
28
,
Melvin R. Duvall
58
,
Sara L. Edwards
1
,
Urs Eggli
59
,
Roy H. J. Erkens
14, 60, 61
,
Marcial Escudero
24
,
Manuel De la Estrella
62
,
FEDERICO FABRIANI
45
,
Michael P. Fay
1
,
Paola de L Ferreira
63, 64
,
Sarah Z Ficinski
1
,
Rachael Fowler
30
,
Sue Frisby
1
,
LIN FU
65
,
Tim Fulcher
1
,
M. Galbany-Casals
66
,
ELLIOT M. GARDNER
67
,
DMITRY A. GERMAN
68
,
Augusto Giaretta
69
,
Marc Gibernau
70
,
LYNN J. GILLESPIE
71
,
Cynthia C. González
72
,
DAVID J. GOYDER
1
,
Sean W. Graham
17
,
Aurélie Grall
1
,
Laura Green
1
,
Bee F. Gunn
20
,
Diego G Gutiérrez
73
,
Jan Hackel
1, 74
,
THOMAS HAEVERMANS
75
,
Anna L Haigh
1
,
Jocelyn C Hall
76
,
Tony Hall
1
,
Melissa J. Harrison
3
,
Sebastian A. Hatt
1
,
Oriane Hidalgo
77
,
T.R. Hodkinson
78
,
Gareth D. Holmes
20
,
HELEN HOPKINS
1
,
Christopher J. Jackson
20
,
Shelley A. James
51
,
RICHARD W. JOBSON
28
,
Gudrun Kadereit
79
,
Imalka M Kahandawala
1
,
KENT KAINULAINEN
80
,
Masahiro Kato
81
,
Elizabeth A Kellogg
82
,
Graham King
83
,
Beata Klejevskaja
84
,
Bente B Klitgaard
1
,
Ronell R. Klopper
85, 86
,
Sandra Knapp
87
,
Marcus Koch
88
,
Frederic Lens
14
,
Christine J Leon
1
,
ÉTIENNE LÉVEILLÉ-BOURRET
90
,
GWILYM B. LEWIS
1
,
De‐Zhu Li
19
,
Li Lan
91
,
Tatyana Livshultz
93, 94
,
David Lorence
95
,
Meng Lu
1
,
Patricia Lu Irving
28
,
Jaquelini Luber
96
,
EVE LUCAS
1
,
Manuel Luján
1
,
Mabel Lum
97
,
Terry D. Macfarlane
51
,
Carlos Magdalena
1
,
Vidal F Mansano
96
,
Lizo E. Masters
1
,
Simon J Mayo
1
,
Kristina McColl
28
,
Angela McDonnell
98
,
Andrew E. McDougall
56
,
TODD G.B. McLAY
20
,
HG Mcpherson
28
,
ROSA I. MENESES
99
,
Vincent S. F. T. Merckx
14
,
Fabian A. Michelangeli
100
,
John D. Mitchell
100
,
ALEXANDRE K. MONRO
1
,
Michael J Moore
101
,
Taryn L Mueller
102
,
KLAUS MUMMENHOFF
13
,
JÉRÔME MUNZINGER
103
,
Priscilla Muriel
104
,
DANIEL J. MURPHY
20
,
Katharina Nargar
3, 35
,
Lars Nauheimer
3
,
Francis J. Nge
31
,
RETO NYFFELER
105
,
Andrés Orejuela
106, 107
,
DEISE JOSELY PEREIRA GONÇALVES
15
,
Luis Palazzesi
73
,
Ariane Luna Peixoto
96
,
Susan K Pell
108
,
Jaume Pellicer
77
,
DARIN S. PENNEYS
109
,
Oscar A. Perez-Escobar
1
,
Claes Persson
110
,
MARC PIGNAL
75
,
YOHAN PILLON
111
,
José Rubens Pirani
10
,
GREGORY M. PLUNKETT
100
,
Robyn F. Powell
1
,
Ghillean T. Prance
1
,
Carmen Puglisi
1, 43
,
Ming Qin
65
,
RICHARD K. RABELER
18
,
Paul E. J. Rees
1
,
Matt Renner
28
,
Eric H. Roalson
112
,
MICHELE RODDA
113
,
Zachary S. Rogers
114
,
Saba Rokni
1
,
ROLF RUTISHAUSER
105
,
MIGUEL F. DE SALAS
115
,
HANNO SCHAEFER
15
,
Rowan Schley
116
,
ALEXANDER N. SCHMIDT-LEBUHN
35
,
A Shapcott
117
,
Ihsan Al-Shehbaz
43
,
Kelly Shepherd
51
,
Mark P. Simmons
118
,
André O Simões
119
,
Ana Rita Giraldes Simões
1
,
Michelle Siros
1, 120
,
Eric de Camargo Smidt
121
,
James F. Smith
38
,
Neil Snow
122
,
Douglas E. Soltis
123
,
Pamela S. Soltis
123
,
Robert J. Soreng
124
,
Cynthia Sothers
1
,
Julian R. Starr
125
,
Peter F. Stevens
43
,
Shannon C.K. Straub
126
,
Lena Struwe
127
,
Jennifer M. Taylor
91
,
Ian R H Telford
22
,
Andrew J Thornhill
22, 31, 52
,
Ifeanna Tooth
28
,
Anna Trias-Blasi
1
,
F Udovicic
20
,
TIMOTHY M.A. UTTERIDGE
1
,
José Carlos Del Valle
24
,
G Anthony Verboom
128
,
Helen P. Vonow
31
,
Jurriaan M de Vos
129
,
Noor Al-Wattar
1
,
Jenny Waycott
31, 52
,
CASSIANO A. DORNELES WELKER
130
,
Adam J White
131
,
JAN J. WIERINGA
14
,
Luis T. Williamson
56
,
Trevor C. Wilson
28
,
Sin Wa Wong
132
,
Lisa A. Woods
28
,
Roseina Woods
1
,
Stuart Worboys
3
,
Martin Xanthos
1
,
Ya Yang
133
,
Yu-Xiao Zhang
134
,
Meng Yuan Zhou
19
,
SUE ZMARZTY
1
,
Fernando O Zuloaga
135
,
Alexandre Antonelli
1, 110, 136, 137
,
Sidonie Bellot
1
,
D.M. Crayn
3
,
OLWEN M. GRACE
1, 106
,
Paul J. Kersey
1
,
Ilia J. Leitch
1
,
Hervé Sauquet
28
,
S A. SMITH
18
,
WOLF L. EISERHARDT
1, 64
,
Félix Forest
1
,
William J. Baker
1, 64
4
10
12
Smith College, Northampton, USA
|
20
Royal Botanic Gardens Victoria, Melbourne, Australia
|
28
National Herbarium of NSW, Botanic Gardens of Sydney, Mount Annan, Australia
|
31
State Herbarium of South Australia, Botanic Gardens and State Herbarium, Adelaide, Australia
|
34
36
Queensland Herbarium and Biodiversity Science, Brisbane Botanic Gardens, Toowong, Australia
|
39
Biodiversity and Conservation Science, Department of Biodiversity, Conservation and Attractions, Government of Western Australia, Kensington, Australia
|
40
Conservatoire et Jardin Botaniques de Genève, Chambésy, Switzerland
|
42
43
Missouri Botanical Garden, St. Louis, USA
|
49
Plant Gateway, Den Haag, The Netherlands
|
50
51
Western Australian Herbarium, Department of Biodiversity, Conservation and Attractions, Government of Western Australia, Kensington, Australia
|
55
Northern Territory Herbarium Department of Environment Parks & Water Security, Northern Territory Government, Palmerston, Australia
|
59
Sukkulenten-Sammlung Zürich/ Grün Stadt Zürich, Zürich, Switzerland
|
69
Faculdade de Ciências Biológicas E Ambientais, Universidade Federal da Grande Dourados, Dourados, Brazil
|
71
Canadian Museum of Nature, Ottawa, Canada
|
73
Museo Argentino de Ciencias Naturales (MACN-CONICET), Buenos Aires, Argentina
|
80
Gothenburg Botanical Garden, Gothenburg, Sweden
|
81
National Museum of Nature and Science, Tsukuba, Japan
|
82
Donald Danforth Plant Science Center, St. Louis, USA
|
84
Synergy SRG, Luton, UK
|
87
Natural History Museum, London, UK
|
93
95
National Tropical Botanical Garden, Kalaheo, USA
|
97
Bioplatforms Australia Ltd, Sydney, Australia
|
99
100
New York Botanical Garden, Bronx, USA
|
101
Department of Biology, Oberlin College, Oberlin, USA
|
107
Grupo de Investigación en Recursos Naturales Amazónicos, Instituto Tecnológico del Putumayo, Mocoa, Colombia
|
108
US Botanic Garden, Washington, USA
|
109
110
113
National Parks Board, Singapore Botanic Gardens, Singapore, Singapore
|
126
Hobart and William Smith Colleges, Geneva, USA
|
135
Instituto de Botánica Darwinion, San Isidro, Argentina
|
Тип публикации: Journal Article
Дата публикации: 2024-04-24
scimago Q1
wos Q1
БС1
SJR: 18.288
CiteScore: 78.1
Impact factor: 48.5
ISSN: 00280836, 14764687
PubMed ID:
38658746
Краткое описание
Angiosperms are the cornerstone of most terrestrial ecosystems and human livelihoods1,2. A robust understanding of angiosperm evolution is required to explain their rise to ecological dominance. So far, the angiosperm tree of life has been determined primarily by means of analyses of the plastid genome3,4. Many studies have drawn on this foundational work, such as classification and first insights into angiosperm diversification since their Mesozoic origins5–7. However, the limited and biased sampling of both taxa and genomes undermines confidence in the tree and its implications. Here, we build the tree of life for almost 8,000 (about 60%) angiosperm genera using a standardized set of 353 nuclear genes8. This 15-fold increase in genus-level sampling relative to comparable nuclear studies9 provides a critical test of earlier results and brings notable change to key groups, especially in rosids, while substantiating many previously predicted relationships. Scaling this tree to time using 200 fossils, we discovered that early angiosperm evolution was characterized by high gene tree conflict and explosive diversification, giving rise to more than 80% of extant angiosperm orders. Steady diversification ensued through the remaining Mesozoic Era until rates resurged in the Cenozoic Era, concurrent with decreasing global temperatures and tightly linked with gene tree conflict. Taken together, our extensive sampling combined with advanced phylogenomic methods shows the deep history and full complexity in the evolution of a megadiverse clade.
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MLA
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ГОСТ
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Zuntini A. R. et al. Phylogenomics and the rise of the angiosperms // Nature. 2024. Vol. 629. No. 8013. pp. 843-850.
ГОСТ со всеми авторами (до 50)
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Zuntini A. R. et al. Phylogenomics and the rise of the angiosperms // Nature. 2024. Vol. 629. No. 8013. pp. 843-850.
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BibTex (до 50 авторов)
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@article{2024_Zuntini,
author = {Alexandre Rizzo Zuntini and Tom Carruthers and OLIVIER MAURIN and Paul Bailey and Kevin Leempoel and Grace E Brewer and Niroshini Epitawalage and Elaine Françoso and Berta Gallego and Catherine Mcginnie and RAQUEL NEGRÃO and Shyamali R Roy and Lalita Simpson and Eduardo Toledo Romero and Vanessa M. A. Barber and Laura Botigué and James J. Clarkson and Robyn S Cowan and Steven Dodsworth and MATTHEW JOHNSON and JAN T. KIM and Lisa Pokorny and NORMAN J. WICKETT and GUILHERME MEDEIROS ANTAR and Lucinda DeBolt and Karime Gutierrez and Kasper Hendriks and Alina Hoewener and AI-QUN HU and Elizabeth M. Joyce and Izai A B S Kikuchi and Isabel Larridon and Drew A Larson and Elton John de Lírio and Jing-Xia Liu and Panagiota Malakasi and Natalia A S Przelomska and Toral Shah and Juan Viruel and Theodore R. Allnutt and G. K. Ameka and Rose L. Andrew and Marc S Appelhans and Montserrat Arista and María Jesús Ariza and Juan Arroyo and Watchara Arthan and Julien B. Bachelier and C. Donovan Bailey and Helen F. Barnes and others},
title = {Phylogenomics and the rise of the angiosperms},
journal = {Nature},
year = {2024},
volume = {629},
publisher = {Springer Nature},
month = {apr},
url = {https://www.nature.com/articles/s41586-024-07324-0},
number = {8013},
pages = {843--850},
doi = {10.1038/s41586-024-07324-0}
}
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MLA
Скопировать
Zuntini, Alexandre Rizzo, et al. “Phylogenomics and the rise of the angiosperms.” Nature, vol. 629, no. 8013, Apr. 2024, pp. 843-850. https://www.nature.com/articles/s41586-024-07324-0.