ColabFold: making protein folding accessible to all
Milot Mirdita
1
,
Konstantin Schütze
2
,
Y. Moriwaki
3, 4
,
Lim Heo
5
,
Sergey Ovchinnikov
6, 7
,
Martin Steinegger
2, 8, 9
4
Publication type: Journal Article
Publication date: 2022-05-30
scimago Q1
wos Q1
SJR: 17.251
CiteScore: 49.0
Impact factor: 32.1
ISSN: 15487091, 15487105
PubMed ID:
35637307
Biochemistry
Molecular Biology
Cell Biology
Biotechnology
Abstract
ColabFold offers accelerated prediction of protein structures and complexes by combining the fast homology search of MMseqs2 with AlphaFold2 or RoseTTAFold. ColabFold’s 40−60-fold faster search and optimized model utilization enables prediction of close to 1,000 structures per day on a server with one graphics processing unit. Coupled with Google Colaboratory, ColabFold becomes a free and accessible platform for protein folding. ColabFold is open-source software available at
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GOST
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Mirdita M. et al. ColabFold: making protein folding accessible to all // Nature Methods. 2022. Vol. 19. No. 6. pp. 679-682.
GOST all authors (up to 50)
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Mirdita M., Schütze K., Moriwaki Y., Heo L., Ovchinnikov S., Steinegger M. ColabFold: making protein folding accessible to all // Nature Methods. 2022. Vol. 19. No. 6. pp. 679-682.
Cite this
RIS
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TY - JOUR
DO - 10.1038/s41592-022-01488-1
UR - https://www.nature.com/articles/s41592-022-01488-1
TI - ColabFold: making protein folding accessible to all
T2 - Nature Methods
AU - Mirdita, Milot
AU - Schütze, Konstantin
AU - Moriwaki, Y.
AU - Heo, Lim
AU - Ovchinnikov, Sergey
AU - Steinegger, Martin
PY - 2022
DA - 2022/05/30
PB - Springer Nature
SP - 679-682
IS - 6
VL - 19
PMID - 35637307
SN - 1548-7091
SN - 1548-7105
ER -
Cite this
BibTex (up to 50 authors)
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@article{2022_Mirdita,
author = {Milot Mirdita and Konstantin Schütze and Y. Moriwaki and Lim Heo and Sergey Ovchinnikov and Martin Steinegger},
title = {ColabFold: making protein folding accessible to all},
journal = {Nature Methods},
year = {2022},
volume = {19},
publisher = {Springer Nature},
month = {may},
url = {https://www.nature.com/articles/s41592-022-01488-1},
number = {6},
pages = {679--682},
doi = {10.1038/s41592-022-01488-1}
}
Cite this
MLA
Copy
Mirdita, Milot, et al. “ColabFold: making protein folding accessible to all.” Nature Methods, vol. 19, no. 6, May. 2022, pp. 679-682. https://www.nature.com/articles/s41592-022-01488-1.
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