Molecular Biology, volume 48, issue 4, pages 563-572
High expression levels and nuclear localization of novel Danio rerio ncRNA transcribed from a genomic region containing repetitive elements
Publication type: Journal Article
Publication date: 2014-07-01
Journal:
Molecular Biology
Quartile SCImago
Q4
Quartile WOS
Q4
Impact factor: 1.2
ISSN: 00268933, 16083245
Structural Biology
Biophysics
Abstract
Noncoding and repetitive sequences make up a large part of the genome of high eukaryotes, but the elucidation of their roles and mechanisms of action are poorly understood. In this work, we found that interstitial telomeric repeats in the genome of Danio rerio colocalize with repetitive elements, including hAT and EnSpm, which are widely represented in vertebrate genomes. The investigation of a genomic region containing two pairs of these repeats located in close proximity showed that the area is transcribed. RNA-dependent structures containing this sequence were identified in D. rerio fibroblast nuclei, which indicates the functional importance of genomic repetitive elements or their transcripts.
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Shubernetskaya O. S. et al. High expression levels and nuclear localization of novel Danio rerio ncRNA transcribed from a genomic region containing repetitive elements // Molecular Biology. 2014. Vol. 48. No. 4. pp. 563-572.
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Shubernetskaya O. S., Skvortsov D. A., Evfratov S. A., Rubtsova M. P., Belova E. V., Strelkova O. S., Cherepaninets V. D., Zhironkina O. A., OLOVNIKOV A., Zvereva M. E., Kireev I. I., Dontsova O. A. High expression levels and nuclear localization of novel Danio rerio ncRNA transcribed from a genomic region containing repetitive elements // Molecular Biology. 2014. Vol. 48. No. 4. pp. 563-572.
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TY - JOUR
DO - 10.1134/S002689331404013X
UR - https://doi.org/10.1134%2FS002689331404013X
TI - High expression levels and nuclear localization of novel Danio rerio ncRNA transcribed from a genomic region containing repetitive elements
T2 - Molecular Biology
AU - Shubernetskaya, O S
AU - Skvortsov, D A
AU - Evfratov, S A
AU - Rubtsova, M. P.
AU - Belova, E. V.
AU - Strelkova, O S
AU - Cherepaninets, V D
AU - Zhironkina, O A
AU - OLOVNIKOV, A.M.
AU - Zvereva, M E
AU - Kireev, I I
AU - Dontsova, O. A.
PY - 2014
DA - 2014/07/01 00:00:00
PB - Pleiades Publishing
SP - 563-572
IS - 4
VL - 48
SN - 0026-8933
SN - 1608-3245
ER -
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@article{2014_Shubernetskaya,
author = {O S Shubernetskaya and D A Skvortsov and S A Evfratov and M. P. Rubtsova and E. V. Belova and O S Strelkova and V D Cherepaninets and O A Zhironkina and A.M. OLOVNIKOV and M E Zvereva and I I Kireev and O. A. Dontsova},
title = {High expression levels and nuclear localization of novel Danio rerio ncRNA transcribed from a genomic region containing repetitive elements},
journal = {Molecular Biology},
year = {2014},
volume = {48},
publisher = {Pleiades Publishing},
month = {jul},
url = {https://doi.org/10.1134%2FS002689331404013X},
number = {4},
pages = {563--572},
doi = {10.1134/S002689331404013X}
}
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Shubernetskaya, O. S., et al. “High expression levels and nuclear localization of novel Danio rerio ncRNA transcribed from a genomic region containing repetitive elements.” Molecular Biology, vol. 48, no. 4, Jul. 2014, pp. 563-572. https://doi.org/10.1134%2FS002689331404013X.